RNA id: TU142246



Basic Information


Item Value
RNA id TU142246
length 323
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G113586
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27155535 ~ 27155857 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTACAACTTGACTGCCAGTCAAAACCCTTCAGGTACATGTGGATCGCTTCCCAAGTTTATCACAGCAACAGTAGGAACCCTTCAGTGCATTACGAGCCCAGGAAGTaaagtcaccgacacaatgccagatcgtttgtcttcagtttatttttgcaacaacacacacttttatacatgtcagaaaTCTGATTGCCAAGAGTTCCGGGGCAGGTACATACagatattacaaacatattacagatctagttgctaggcagacatgaAATGTGTTCGATCTCATAAGTCATAACATTCATAACACACTCAAGAGTTTCAGTTGACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142233 lncRNA downstream 95941 27059369 ~ 27059594 (-) True G113573
TU142110 lncRNA downstream 1117212 26001446 ~ 26038323 (-) True G113479
TU142114 lncRNA downstream 1145036 26001446 ~ 26010499 (-) False G113479
TU142099 lncRNA downstream 1159606 25995641 ~ 25995929 (-) True G113468
TU142052 lncRNA downstream 1288256 25866385 ~ 25867279 (-) True G113431
TU142247 lncRNA upstream 9322 27165179 ~ 27165398 (-) True G113587
TU142308 lncRNA upstream 114602 27270459 ~ 27363030 (-) True G113631
TU142352 lncRNA upstream 644081 27799938 ~ 27800294 (-) True G113667
TU142359 lncRNA upstream 646633 27802490 ~ 27805153 (-) True G113673
TU142368 lncRNA upstream 700254 27856111 ~ 27856461 (-) True G113681
AMCG00006929 mRNA downstream 515587 26608543 ~ 26639948 (-) True AMCG00006929
AMCG00006926 mRNA downstream 794084 26192389 ~ 26361451 (-) True AMCG00006926
AMCG00006924 mRNA downstream 969773 26184251 ~ 26185762 (-) True AMCG00006924
AMCG00006925 mRNA downstream 1014716 26134171 ~ 26140819 (-) True AMCG00006925
AMCG00006923 mRNA downstream 1050149 26092897 ~ 26105386 (-) True AMCG00006923
AMCG00006932 mRNA upstream 153035 27308892 ~ 27309170 (-) True AMCG00006932
AMCG00006935 mRNA upstream 481363 27637220 ~ 27649919 (-) True AMCG00006935
AMCG00006934 mRNA upstream 512929 27668786 ~ 27677200 (-) True AMCG00006934
AMCG00006938 mRNA upstream 649626 27805483 ~ 27824074 (-) True AMCG00006938
AMCG00006939 mRNA upstream 809110 27964967 ~ 27970379 (-) True AMCG00006939
TU142176 other downstream 654854 26500015 ~ 26500681 (-) True G113530
TU141596 other downstream 3748328 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 6205699 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 6919329 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 7519610 19633237 ~ 19635925 (-) False AMCG00006774
TU142323 other upstream 246743 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 1111405 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 1135598 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 1555362 28711219 ~ 28812548 (-) True G113833

Expression Profile