RNA id: TU142417


Basic Information

Item Value
RNA id TU142417
length 207
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G113722
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28058361 ~ 28058567 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTAAGATTTCTGGACACTTTGTGTAGGTACTGAGATACTGATGATGTATGTTTACTGACTCCCATCTCAGACAGAAGTTTGAAAATCTTTCAGTCACTGTTGGCTTCACAGTGGCATGCTGAGTAGTGACTGGGTGGTATGGTATATAACccttcaaaaatattttgcaccTTAGCTGATTTAGGATTGCTGTAGCAATAGGGTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142368 lncRNA downstream 201900 27856111 ~ 27856461 (-) True G113681
TU142359 lncRNA downstream 253208 27802490 ~ 27805153 (-) True G113673
TU142352 lncRNA downstream 258067 27799938 ~ 27800294 (-) True G113667
TU142308 lncRNA downstream 695331 27270459 ~ 27363030 (-) True G113631
TU142247 lncRNA downstream 892963 27165179 ~ 27165398 (-) True G113587
TU142418 lncRNA upstream 152 28058719 ~ 28058931 (-) True G113723
TU142419 lncRNA upstream 561 28059128 ~ 28076291 (-) False G113724
TU142420 lncRNA upstream 561 28059128 ~ 28060592 (-) True G113724
TU142514 lncRNA upstream 348839 28407406 ~ 28407839 (-) True G113799
TU142539 lncRNA upstream 582562 28641129 ~ 28641437 (-) True G113823
AMCG00006940 mRNA downstream 11285 28016663 ~ 28047076 (-) True AMCG00006940
AMCG00006941 mRNA downstream 43033 28002502 ~ 28015328 (-) True AMCG00006941
AMCG00006939 mRNA downstream 87982 27964967 ~ 27970379 (-) True AMCG00006939
AMCG00006938 mRNA downstream 234287 27805483 ~ 27824074 (-) True AMCG00006938
AMCG00006934 mRNA downstream 381161 27668786 ~ 27677200 (-) True AMCG00006934
AMCG00006948 mRNA upstream 82690 28141257 ~ 28144216 (-) True AMCG00006948
AMCG00006949 mRNA upstream 159046 28217613 ~ 28223587 (-) True AMCG00006949
AMCG00006955 mRNA upstream 691695 28750262 ~ 28811479 (-) True AMCG00006955
AMCG00006957 mRNA upstream 809335 28867902 ~ 28868926 (-) True AMCG00006957
AMCG00006956 mRNA upstream 821750 28880317 ~ 28892493 (-) True AMCG00006956
TU142323 other downstream 531013 27402600 ~ 27527348 (-) True G113645
TU142176 other downstream 1557680 26500015 ~ 26500681 (-) True G113530
TU141596 other downstream 4651154 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 7108525 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 7822155 20235856 ~ 20236206 (-) True G112420
TU142485 other upstream 208695 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 232888 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 652652 28711219 ~ 28812548 (-) True G113833

Expression Profile