RNA id: AMCG00007136


Basic Information

Item Value
RNA id AMCG00007136
length 294
RNA type mRNA
GC content 0.57
exon number 4
gene id AMCG00007136
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5149203 ~ 5151982 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCTTGGCCGGCACTGTCACCgcacatCTCCGAGAGTTGCACAGGCTGGGGGGGGATCTGTCGGTGCAGGACTCGGCTGGGTGGACGCTGCTGCATCACGCTGCCGACGTCGGGAGTAAGGAGATTGTCAAGTACATCATCGACAATGCTCCACAGGAGCTTTTGGACttaacagagaaagaaaaTGGAGAGACTGTCCTTCATAAAGCTGCCTCGCTGTGCCAGAGGACCATCTGCCATTACCTGGTGGAGGCCGGAGCGTCGCTAATGAAGACGGACCTGCAGGTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU26825 lncRNA downstream 16661 5132328 ~ 5132542 (-) True G21462
TU26775 lncRNA downstream 121477 5027202 ~ 5027726 (-) True G21423
TU26771 lncRNA downstream 185643 4963357 ~ 4963560 (-) True G21419
TU26770 lncRNA downstream 189450 4959516 ~ 4959753 (-) True G21418
TU26764 lncRNA downstream 203483 4942071 ~ 4945720 (-) True G21414
TU26919 lncRNA upstream 343367 5495349 ~ 5495735 (-) True G21522
TU26941 lncRNA upstream 363004 5514986 ~ 5515971 (-) True G21535
TU26943 lncRNA upstream 365245 5517227 ~ 5518751 (-) True G21537
TU26942 lncRNA upstream 369633 5521615 ~ 5523677 (-) True G21536
TU26960 lncRNA upstream 407612 5559594 ~ 5562208 (-) True G21550
AMCG00007137 mRNA downstream 27838 5113262 ~ 5121365 (-) True AMCG00007137
AMCG00007129 mRNA downstream 190533 4948505 ~ 4958670 (-) True AMCG00007129
AMCG00007131 mRNA downstream 217581 4925129 ~ 4931622 (-) True AMCG00007131
AMCG00007133 mRNA downstream 228593 4918537 ~ 4920610 (-) True AMCG00007133
AMCG00007132 mRNA downstream 230710 4895642 ~ 4918493 (-) True AMCG00007132
AMCG00007138 mRNA upstream 14913 5166895 ~ 5209036 (-) True AMCG00007138
AMCG00007140 mRNA upstream 150069 5302051 ~ 5304131 (-) True AMCG00007140
AMCG00007139 mRNA upstream 156433 5308415 ~ 5319239 (-) True AMCG00007139
AMCG00007145 mRNA upstream 286280 5438262 ~ 5447370 (-) True AMCG00007145
AMCG00007149 mRNA upstream 319122 5471104 ~ 5485827 (-) True AMCG00007149
TU26789 other downstream 91797 5056787 ~ 5057406 (-) True G21429
TU26778 other downstream 99683 5042520 ~ 5049520 (-) False G21426
TU26783 other downstream 100364 5041659 ~ 5048839 (-) True G21426
TU26061 other downstream 2978633 2167310 ~ 2170570 (-) False AMCG00007059
TU26054 other downstream 3003388 2144716 ~ 2145815 (-) False AMCG00007059
TU27087 other upstream 664827 5816809 ~ 5820284 (-) True G21632
TU27173 other upstream 855658 6007640 ~ 6014169 (-) False AMCG00007173
TU27501 other upstream 2347465 7499447 ~ 7506875 (-) True G21942
TU27830 other upstream 3241214 8393196 ~ 8396224 (-) True G22200
TU28289 other upstream 5035332 10187314 ~ 10190204 (-) False AMCG00007289

Expression Profile