RNA id: AMCG00007197


Basic Information

Item Value
RNA id AMCG00007197
length 858
RNA type mRNA
GC content 0.64
exon number 7
gene id AMCG00007197
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7222351 ~ 7245987 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGCAGCACCTTGAGCCCCCGGGGGCCCCGTGGCCCCGGCCTGACTGACCTGCACCAGTACAGCCAGTGGCTGGCCAGCCGGCATGAGGCCAGTGTGGAGATCACCGCGGAGAGCTTCATGGAGAGGCTGGACAATGGCGTGCTGCTCTGTCAGTTGGCTCAGACCCTGCTGGAGAAATTCAAGGAGAATGAGTGTGAAGCGCCCAGACCCAGCAAGCCACTCCCCAGCCGGAAGATCCCCTGCCGAGCGAGCGCCCCGTCCGGCTCCTTCTTCGCGAGGGACAACACCGCCAACTTCCTGTCCTGGTGCCGGGAGGTGGGCGTGGGGGAGACGTGCCTGTTCGAGTCTGAGGGGCTGGTTCTTCACAAACAGCCCAGGGAAGTCTGTCTCTGCCTGCTGGAACTGGGAAGAATAGCATCCAGGTACAAAGTGGAGCCCCCCGGGCTGATCAAGCTGGAGAAGGAGATCGAGCAGGAGGAGACggcacccctgccccccccctcgCCGgtgtccccctcccccaccaagTCCCCGGCCAGAAGGAGCACCGGGAAGCTGCTGGACGACGCGTGTCCCAACACGTTCTGTGTGGAGAGGCAGTCTCAGGGCCGCTACCGCGTCGGGGAGAAGATCCTGTTCATCCGGATGCTGCACAACAAGCACGTCATGGTGCGCGTCGGCGGCGGCTGGGAGACCTTCGAGAGCTACCTGCTGAAGCACGACCCCTGCCGCATGCTGCAGATCTCACGCGTTGAAGGCAAGACCTCCCCTCTGCCCAGCAAGGTGCCCAGCATCAAGGACCTGAGCCCCGACAGCTACCTGGTGGTGGCCGCCCACTATCGCAGCAAGAAGTAA

Function

GO: NA

KEGG:

id description
K24627 GAS2, GAS2L; growth arrest-specific protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27327 lncRNA downstream 517689 6704409 ~ 6704662 (-) True G21807
TU27322 lncRNA downstream 533242 6687484 ~ 6689109 (-) True G21803
TU27301 lncRNA downstream 577473 6638997 ~ 6644878 (-) True G21787
TU27299 lncRNA downstream 584042 6635583 ~ 6638309 (-) True G21786
TU27417 lncRNA upstream 78437 7324424 ~ 7327742 (-) True AMCG00007201
TU27647 lncRNA upstream 507427 7753414 ~ 7753697 (-) True G22057
TU27672 lncRNA upstream 654815 7900802 ~ 7901175 (-) True G22077
TU27714 lncRNA upstream 667617 7913604 ~ 7984510 (-) False G22111
TU27713 lncRNA upstream 735361 7981348 ~ 7984510 (-) True G22111
AMCG00007193 mRNA downstream 234416 6979951 ~ 6987935 (-) True AMCG00007193
AMCG00007192 mRNA downstream 254657 6961730 ~ 6967694 (-) True AMCG00007192
AMCG00007191 mRNA downstream 279307 6927600 ~ 6943044 (-) True AMCG00007191
AMCG00007190 mRNA downstream 443801 6764224 ~ 6778550 (-) True AMCG00007190
AMCG00007189 mRNA downstream 465768 6741697 ~ 6756583 (-) True AMCG00007189
AMCG00007199 mRNA upstream 37736 7283723 ~ 7307598 (-) True AMCG00007199
AMCG00007200 mRNA upstream 63769 7309756 ~ 7317222 (-) True AMCG00007200
AMCG00007202 mRNA upstream 73201 7319188 ~ 7323900 (-) True AMCG00007202
AMCG00007201 mRNA upstream 81521 7327508 ~ 7342341 (-) False AMCG00007201
AMCG00007206 mRNA upstream 138433 7384420 ~ 7396801 (-) True AMCG00007206
TU27173 other downstream 1208182 6007640 ~ 6014169 (-) False AMCG00007173
TU27087 other downstream 1402067 5816809 ~ 5820284 (-) True G21632
TU26789 other downstream 2164945 5056787 ~ 5057406 (-) True G21429
TU26778 other downstream 2172831 5042520 ~ 5049520 (-) False G21426
TU26783 other downstream 2173512 5041659 ~ 5048839 (-) True G21426
TU27501 other upstream 253460 7499447 ~ 7506875 (-) True G21942
TU27830 other upstream 1147209 8393196 ~ 8396224 (-) True G22200
TU28289 other upstream 2941327 10187314 ~ 10190204 (-) False AMCG00007289
TU28633 other upstream 6105530 13351517 ~ 13352073 (-) True G22838
TU28749 other upstream 6699656 13945643 ~ 13946065 (-) True G22931

Expression Profile