RNA id: AMCG00007207


Basic Information

Item Value
RNA id AMCG00007207
length 264
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00007207
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7428719 ~ 7429020 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTGACAGCGTGTTCCTGACTGCTTTGCAGCCCAATACTATGGTCAGCAGCTATGCGGTGCCCTCCGAGATCCACCTGGGACACGGCGGGGGGCTCTCGGACAGCGTCACCCGGGCCAAGAGGGTGCAGGAGCAGGTGGCCCTGCGCCTGGCGGAGAAGACCTCCAGCACCATGCCCAGGATGAACGGGTCGGCACAGGTCACCTCCTCCGGTAGGCAGTGTCTGTGCTCTCGGCTCCAGCTGGACGGCCATTCACTTTGA

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27417 lncRNA downstream 100977 7324424 ~ 7327742 (-) True AMCG00007201
TU27327 lncRNA downstream 724057 6704409 ~ 6704662 (-) True G21807
TU27322 lncRNA downstream 739610 6687484 ~ 6689109 (-) True G21803
TU27301 lncRNA downstream 783841 6638997 ~ 6644878 (-) True G21787
TU27300 lncRNA downstream 790660 6635583 ~ 6638059 (-) False G21786
TU27647 lncRNA upstream 324394 7753414 ~ 7753697 (-) True G22057
TU27672 lncRNA upstream 471782 7900802 ~ 7901175 (-) True G22077
TU27714 lncRNA upstream 484584 7913604 ~ 7984510 (-) False G22111
TU27713 lncRNA upstream 552328 7981348 ~ 7984510 (-) True G22111
TU27820 lncRNA upstream 823007 8252027 ~ 8252664 (-) True G22191
AMCG00007205 mRNA downstream 5517 7408648 ~ 7423202 (-) True AMCG00007205
AMCG00007206 mRNA downstream 31918 7384420 ~ 7396801 (-) True AMCG00007206
AMCG00007201 mRNA downstream 86378 7327508 ~ 7342341 (-) False AMCG00007201
AMCG00007202 mRNA downstream 104819 7319188 ~ 7323900 (-) True AMCG00007202
AMCG00007200 mRNA downstream 111497 7309756 ~ 7317222 (-) True AMCG00007200
AMCG00007204 mRNA upstream 31305 7460325 ~ 7468151 (-) True AMCG00007204
AMCG00007211 mRNA upstream 131690 7560710 ~ 7561451 (-) True AMCG00007211
AMCG00007210 mRNA upstream 144282 7573302 ~ 7580896 (-) True AMCG00007210
AMCG00007214 mRNA upstream 155766 7584786 ~ 7591300 (-) True AMCG00007214
AMCG00007213 mRNA upstream 177563 7606583 ~ 7614412 (-) True AMCG00007213
TU27173 other downstream 1414550 6007640 ~ 6014169 (-) False AMCG00007173
TU27087 other downstream 1608435 5816809 ~ 5820284 (-) True G21632
TU26789 other downstream 2371313 5056787 ~ 5057406 (-) True G21429
TU26778 other downstream 2379199 5042520 ~ 5049520 (-) False G21426
TU26783 other downstream 2379880 5041659 ~ 5048839 (-) True G21426
TU27501 other upstream 70427 7499447 ~ 7506875 (-) True G21942
TU27830 other upstream 964176 8393196 ~ 8396224 (-) True G22200
TU28289 other upstream 2758294 10187314 ~ 10190204 (-) False AMCG00007289
TU28633 other upstream 5922497 13351517 ~ 13352073 (-) True G22838
TU28749 other upstream 6516623 13945643 ~ 13946065 (-) True G22931

Expression Profile