RNA id: AMCG00007256


Basic Information

Item Value
RNA id AMCG00007256
length 459
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00007256
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 9091932 ~ 9098606 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGCCAGGAGCGGGTGTCCTGGGACAAGGAGGAGAGTGCAGACGCCCACATGGCCTCCCAGTTGCCTCTGCACAACCTGCTGCACAACAAACCTCACCCCGAGGAGCTGCCCGCTGTCGTCACCAACATCCCCCCAGACTGCGACTGGGACAACATGGTGTCTGCCCAGCAACGCATGgaatCTGACAGCAATAAAGTATGTTCCCTCTACTCCTTCCGGAATAACTCTACCTCACCACACAAGCCCGAGGAGGGGGCCCGTGAGCGCAGTGACCTCCTGACAGGCTCCGCCTTCGGGACACCCGAGCGCCGCAAAGGCAGCCTGGCCGACGTGGTGGACACACTGAAACAGAAGAAGCTGGAGGAGATGACAAAGACTGAACAGGATGGTACGTCACACCCCCTCTCCTTTCCAATGCTTGGGATGTGTTACTGTGGCCCTGTGGCCCTGTTCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27941 lncRNA downstream 111114 8976117 ~ 8980818 (-) True G22298
TU27939 lncRNA downstream 111858 8976117 ~ 8980074 (-) False G22298
TU27884 lncRNA downstream 401181 8690198 ~ 8690751 (-) True G22249
TU27848 lncRNA downstream 648788 8439852 ~ 8443144 (-) True G22217
TU27822 lncRNA downstream 837265 8253893 ~ 8254667 (-) True G22193
TU27949 lncRNA upstream 82412 9181018 ~ 9184829 (-) True G22305
TU28070 lncRNA upstream 319162 9417768 ~ 9437269 (-) True G22393
TU28077 lncRNA upstream 359186 9457792 ~ 9463337 (-) False AMCG00007267
TU28101 lncRNA upstream 500086 9598692 ~ 9599154 (-) True G22414
TU28102 lncRNA upstream 525960 9624566 ~ 9624878 (-) True G22415
AMCG00007255 mRNA downstream 80731 8981570 ~ 9011201 (-) True AMCG00007255
AMCG00007249 mRNA downstream 393783 8695461 ~ 8698149 (-) True AMCG00007249
AMCG00007248 mRNA downstream 465587 8620538 ~ 8626345 (-) True AMCG00007248
AMCG00007247 mRNA downstream 474633 8603478 ~ 8617299 (-) True AMCG00007247
AMCG00007246 mRNA downstream 531492 8552097 ~ 8560440 (-) True AMCG00007246
AMCG00007261 mRNA upstream 90005 9188611 ~ 9233981 (-) True AMCG00007261
AMCG00007260 mRNA upstream 219574 9318180 ~ 9318690 (-) True AMCG00007260
AMCG00007258 mRNA upstream 232583 9331189 ~ 9335174 (-) True AMCG00007258
AMCG00007262 mRNA upstream 237121 9335727 ~ 9339155 (-) True AMCG00007262
AMCG00007259 mRNA upstream 251438 9350044 ~ 9383687 (-) True AMCG00007259
TU27830 other downstream 695708 8393196 ~ 8396224 (-) True G22200
TU27501 other downstream 1585057 7499447 ~ 7506875 (-) True G21942
TU27173 other downstream 3077763 6007640 ~ 6014169 (-) False AMCG00007173
TU27087 other downstream 3271648 5816809 ~ 5820284 (-) True G21632
TU26789 other downstream 4034526 5056787 ~ 5057406 (-) True G21429
TU28289 other upstream 1088708 10187314 ~ 10190204 (-) False AMCG00007289
TU28633 other upstream 4252911 13351517 ~ 13352073 (-) True G22838
TU28749 other upstream 4847037 13945643 ~ 13946065 (-) True G22931
TU29239 other upstream 7222391 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other upstream 7222431 16321037 ~ 16322651 (-) False AMCG00007365

Expression Profile