RNA id: AMCG00007321



Basic Information


Item Value
RNA id AMCG00007321
length 318
RNA type mRNA
GC content 0.43
exon number 3
gene id AMCG00007321
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13623144 ~ 13624807 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTTGTACAGAAGGTAAACGGCCATCTTGCAACAGGGGAGTATGGCAGACTATTTGCAGTTGTACACTTTGCCAGTCGTCAGTGGAAAGTAACAAATGAAGACCTGATACTCATTGAGAACCATATAGATGCTGAATGTGGGGAGCGAATCAGAATGGAAAAGGTAATGCTGGTTGGTGGAGAAGATTTCACTCTAATAGGAAGGCCAATTCTAGGCCGGGATTTGGTGCGAGTAGAAGCCACTGTTATTGAGAAGACAGAATCCTGGCCTAAAGTACACATGAGGTTTTGGAAAAGGCACAGAtatcagagaaaaaaa

Function


GO: NA

KEGG:

id description
K02888 RP-L21, MRPL21, rplU; large subunit ribosomal protein L21

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU28640 lncRNA upstream 130810 13483495 ~ 13492334 (+) True G22844
TU28634 lncRNA upstream 268688 13353613 ~ 13354456 (+) True G22839
TU28632 lncRNA upstream 271225 13351626 ~ 13351919 (+) True G22837
TU28611 lncRNA upstream 670048 12952875 ~ 12953096 (+) True G22816
TU28572 lncRNA upstream 1725007 11897543 ~ 11898137 (+) True G22781
TU28694 lncRNA downstream 6739 13631546 ~ 13631960 (+) True G22887
TU28695 lncRNA downstream 12617 13637424 ~ 13637624 (+) True G22888
TU28701 lncRNA downstream 52150 13676957 ~ 13677701 (+) True G22893
TU28748 lncRNA downstream 320831 13945638 ~ 13946065 (+) True G22930
TU28750 lncRNA downstream 397284 14022091 ~ 14022317 (+) True G22932
AMCG00007317 mRNA upstream 72023 13541756 ~ 13551121 (+) True AMCG00007317
AMCG00007311 mRNA upstream 2019426 11588634 ~ 11603718 (+) True AMCG00007311
AMCG00007310 mRNA upstream 2845437 10758834 ~ 10777707 (+) True AMCG00007310
AMCG00007306 mRNA upstream 2879469 10739045 ~ 10743675 (+) True AMCG00007306
AMCG00007305 mRNA upstream 2955849 10660181 ~ 10667295 (+) True AMCG00007305
AMCG00007322 mRNA downstream 21820 13646627 ~ 13647013 (+) True AMCG00007322
AMCG00007328 mRNA downstream 350498 13975305 ~ 13981853 (+) True AMCG00007328
AMCG00007327 mRNA downstream 424586 14049393 ~ 14064082 (+) True AMCG00007327
AMCG00007329 mRNA downstream 533377 14158184 ~ 14185574 (+) True AMCG00007329
AMCG00007332 mRNA downstream 740901 14365708 ~ 14383919 (+) True AMCG00007332
TU28420 other upstream 3010040 10611196 ~ 10613104 (+) True AMCG00007307
TU28037 other upstream 4123416 9436524 ~ 9499728 (+) True G22372
TU27900 other upstream 4911833 8704657 ~ 8711311 (+) True AMCG00007253
TU27825 other upstream 5226902 8367436 ~ 8396242 (+) True AMCG00007243
TU27445 other upstream 6244198 7374323 ~ 7378946 (+) True G21891
TU28829 other downstream 853866 14478673 ~ 14489692 (+) True AMCG00007337
TU28988 other downstream 1661690 15286497 ~ 15287960 (+) False AMCG00007352
TU29675 other downstream 4573961 18198768 ~ 18201960 (+) True AMCG00007417
TU29676 other downstream 4582271 18207078 ~ 18208308 (+) True G23698
TU29705 other downstream 4665301 18290108 ~ 18292338 (+) True G23724

Expression Profile