RNA id: AMCG00007323


Basic Information

Item Value
RNA id AMCG00007323
length 438
RNA type mRNA
GC content 0.57
exon number 5
gene id AMCG00007323
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13743970 ~ 13856397 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTATAGATCACCAGAACTCACAAgcatttctctttcttcctcagACCTGAGCCAAGACAAGACCCTCCAGGAGATAACACAGGCCCGCGGCGAGGCGGATCAGAAGCAGGCCGGCGGGGAGGATGTGGATCTGGTATCTGCTCCTGGGTTCGGGCTCgggctccggctccggctcgGTCGTGCAGTAGAAGATGGCACCCTTGCCATAGAGTGCCAGCTGCTCCCAGGGAACAACTTCACCACAGAGTGCAACATCCCAGGGAACTTCCGGTGTCTGGATGGGAAATGTGTGCCCGGCGGATGGCAGTGCGATGGGATGCCAGACTGCTTTGACCAGAGCGACGAGAAGGGATGCCTGCAACTGGCCTCCATTTCTTTGATTATAACCCCTCTGCTGGGAATGGGGCCCTTGTTTGGGATAGTGCCCCAGAattag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU28713 lncRNA downstream 94193 13646531 ~ 13649777 (-) True G22902
TU28712 lncRNA downstream 112679 13630245 ~ 13631291 (-) True G22901
TU28614 lncRNA downstream 750034 12993677 ~ 12993936 (-) True G22819
TU28586 lncRNA downstream 1650494 12081746 ~ 12093476 (-) True G22794
TU28576 lncRNA downstream 1836476 11907274 ~ 11907494 (-) True G22785
TU28752 lncRNA upstream 175952 14032349 ~ 14033212 (-) False AMCG00007326
TU28762 lncRNA upstream 204373 14060770 ~ 14061129 (-) True G22941
TU28763 lncRNA upstream 205337 14061734 ~ 14062135 (-) True G22942
TU28764 lncRNA upstream 207098 14063495 ~ 14065298 (-) True G22943
TU28799 lncRNA upstream 328305 14184702 ~ 14189688 (-) True G22971
AMCG00007318 mRNA downstream 56906 13677981 ~ 13687064 (-) True AMCG00007318
AMCG00007319 mRNA downstream 129525 13576675 ~ 13614445 (-) True AMCG00007319
AMCG00007320 mRNA downstream 349544 13392900 ~ 13394426 (-) True AMCG00007320
AMCG00007316 mRNA downstream 479008 13062794 ~ 13264962 (-) True AMCG00007316
AMCG00007315 mRNA downstream 1424256 12317831 ~ 12319714 (-) True AMCG00007315
AMCG00007325 mRNA upstream 38488 13894885 ~ 13911848 (-) True AMCG00007325
AMCG00007324 mRNA upstream 82943 13939340 ~ 13940671 (-) True AMCG00007324
AMCG00007326 mRNA upstream 124977 13981374 ~ 14033164 (-) True AMCG00007326
AMCG00007330 mRNA upstream 417663 14274060 ~ 14274434 (-) True AMCG00007330
AMCG00007331 mRNA upstream 430218 14286615 ~ 14326500 (-) True AMCG00007331
TU28633 other downstream 391897 13351517 ~ 13352073 (-) True G22838
TU28289 other downstream 3553766 10187314 ~ 10190204 (-) False AMCG00007289
TU27830 other downstream 5347746 8393196 ~ 8396224 (-) True G22200
TU27501 other downstream 6237095 7499447 ~ 7506875 (-) True G21942
TU27173 other downstream 7729801 6007640 ~ 6014169 (-) False AMCG00007173
TU28749 other upstream 89246 13945643 ~ 13946065 (-) True G22931
TU29239 other upstream 2464600 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other upstream 2464640 16321037 ~ 16322651 (-) False AMCG00007365
TU29265 other upstream 2673777 16530174 ~ 16621905 (-) False AMCG00007375
TU29633 other upstream 4199073 18055470 ~ 18058949 (-) True G23661

Expression Profile