RNA id: AMCG00007328


Basic Information

Item Value
RNA id AMCG00007328
length 237
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00007328
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13975305 ~ 13981853 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTCATGTCAAGGAGGATTATGCTTCAATTCCTGGCTTCAGTGACATTCCAGAAGAGGAGTTTGCTTTGTATACCGGGAAGGTGGCACTCGACATGATCCAGCGCGCTGAACAGTCAGAGGGAATTGACATCGCCATGTTTTGGAAGTCTCTGTTGAATGGAGTCATCCGACACCCCAATCAGCACAGAAGAGATGATGTGATCAAAAGTAATGAGAAcgtcaataaaaaataa

Function

GO: NA

KEGG: NA

JBrowse2

Loading

Neighbor

RNA id RNA type direction distance location representative gene id
TU28748 lncRNA upstream 29240 13945638 ~ 13946065 (+) True G22930
TU28701 lncRNA upstream 297604 13676957 ~ 13677701 (+) True G22893
TU28695 lncRNA upstream 337681 13637424 ~ 13637624 (+) True G22888
TU28694 lncRNA upstream 343345 13631546 ~ 13631960 (+) True G22887
TU28640 lncRNA upstream 482971 13483495 ~ 13492334 (+) True G22844
TU28750 lncRNA downstream 40238 14022091 ~ 14022317 (+) True G22932
TU28753 lncRNA downstream 58939 14040792 ~ 14041060 (+) True G22935
TU28761 lncRNA downstream 83097 14064950 ~ 14065208 (+) True G22940
TU28765 lncRNA downstream 83518 14065371 ~ 14065644 (+) True G22944
TU28789 lncRNA downstream 194882 14176735 ~ 14215056 (+) False G22962
AMCG00007322 mRNA upstream 328292 13646627 ~ 13647013 (+) True AMCG00007322
AMCG00007321 mRNA upstream 350498 13623144 ~ 13624807 (+) True AMCG00007321
AMCG00007317 mRNA upstream 424184 13541756 ~ 13551121 (+) True AMCG00007317
AMCG00007311 mRNA upstream 2371587 11588634 ~ 11603718 (+) True AMCG00007311
AMCG00007310 mRNA upstream 3197598 10758834 ~ 10777707 (+) True AMCG00007310
AMCG00007327 mRNA downstream 67540 14049393 ~ 14064082 (+) True AMCG00007327
AMCG00007329 mRNA downstream 176331 14158184 ~ 14185574 (+) True AMCG00007329
AMCG00007332 mRNA downstream 383855 14365708 ~ 14383919 (+) True AMCG00007332
AMCG00007335 mRNA downstream 457473 14439326 ~ 14473693 (+) True AMCG00007335
AMCG00007337 mRNA downstream 496910 14478763 ~ 14479838 (+) False AMCG00007337
TU28420 other upstream 3362201 10611196 ~ 10613104 (+) True AMCG00007307
TU28037 other upstream 4475577 9436524 ~ 9499728 (+) True G22372
TU27900 other upstream 5263994 8704657 ~ 8711311 (+) True AMCG00007253
TU27825 other upstream 5579063 8367436 ~ 8396242 (+) True AMCG00007243
TU27445 other upstream 6596359 7374323 ~ 7378946 (+) True G21891
TU28829 other downstream 496820 14478673 ~ 14489692 (+) True AMCG00007337
TU28988 other downstream 1304644 15286497 ~ 15287960 (+) False AMCG00007352
TU29675 other downstream 4216915 18198768 ~ 18201960 (+) True AMCG00007417
TU29676 other downstream 4225225 18207078 ~ 18208308 (+) True G23698
TU29705 other downstream 4308255 18290108 ~ 18292338 (+) True G23724