RNA id: AMCG00007330


Basic Information

Item Value
RNA id AMCG00007330
length 375
RNA type mRNA
GC content 0.58
exon number 1
gene id AMCG00007330
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 14274060 ~ 14274434 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTCCGGCAGAGCTACCCGGGGTTCCCACCTTCAGTCCAAGGAGAACTCGCCCTCAGGACCTTCCTCTGTGCGCTATGCCCAGAAGAGCTCTGTCACTATGTAGGGCTGGCAGCGCCCACCACGCTTGAGCAAGCCTTACAGCTGGCGAACCTTGCAGAAGGGGTGTTCGGTGCCACCCGACCTCAATCCAAACCAGCCCTTCCGTGTCGCCACACTATGGCAGCAGACGAGTCTGACAAGGAGAAAGTGGCCTGCACTTTTTACTGCCAAAAAACCGTACATTTACTGCCAACGCTGCGGCGAGAGAGGCCACATAGCCTAGGTCTTCCGGGCACCACAGCCATGATCTTGAGCCAAGCTGCCCGGAAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU28799 lncRNA downstream 84372 14184702 ~ 14189688 (-) True G22971
TU28764 lncRNA downstream 208762 14063495 ~ 14065298 (-) True G22943
TU28763 lncRNA downstream 211925 14061734 ~ 14062135 (-) True G22942
TU28762 lncRNA downstream 212931 14060770 ~ 14061129 (-) True G22941
TU28752 lncRNA downstream 240848 14032349 ~ 14033212 (-) False AMCG00007326
TU28842 lncRNA upstream 204162 14478596 ~ 14480199 (-) True G23011
TU28944 lncRNA upstream 749807 15024241 ~ 15024745 (-) True G23101
TU28948 lncRNA upstream 856954 15131388 ~ 15131598 (-) True G23105
TU29111 lncRNA upstream 1460191 15734625 ~ 15800952 (-) True G23225
TU29141 lncRNA upstream 1793649 16068083 ~ 16069464 (-) True G23250
AMCG00007326 mRNA downstream 240896 13981374 ~ 14033164 (-) True AMCG00007326
AMCG00007324 mRNA downstream 333389 13939340 ~ 13940671 (-) True AMCG00007324
AMCG00007325 mRNA downstream 362212 13894885 ~ 13911848 (-) True AMCG00007325
AMCG00007323 mRNA downstream 417663 13743970 ~ 13856397 (-) True AMCG00007323
AMCG00007318 mRNA downstream 586996 13677981 ~ 13687064 (-) True AMCG00007318
AMCG00007331 mRNA upstream 12181 14286615 ~ 14326500 (-) True AMCG00007331
AMCG00007333 mRNA upstream 132710 14407144 ~ 14425504 (-) True AMCG00007333
AMCG00007340 mRNA upstream 661165 14935599 ~ 14937527 (-) True AMCG00007340
AMCG00007344 mRNA upstream 877994 15152428 ~ 15153708 (-) True AMCG00007344
AMCG00007347 mRNA upstream 901752 15176186 ~ 15184980 (-) True AMCG00007347
TU28749 other downstream 327995 13945643 ~ 13946065 (-) True G22931
TU28633 other downstream 921987 13351517 ~ 13352073 (-) True G22838
TU28289 other downstream 4083856 10187314 ~ 10190204 (-) False AMCG00007289
TU27830 other downstream 5877836 8393196 ~ 8396224 (-) True G22200
TU27501 other downstream 6767185 7499447 ~ 7506875 (-) True G21942
TU29239 other upstream 2046563 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other upstream 2046603 16321037 ~ 16322651 (-) False AMCG00007365
TU29265 other upstream 2255740 16530174 ~ 16621905 (-) False AMCG00007375
TU29633 other upstream 3781036 18055470 ~ 18058949 (-) True G23661
TU29846 other upstream 4501926 18776360 ~ 18777638 (-) True G23838