RNA id: AMCG00007375


Basic Information

Item Value
RNA id AMCG00007375
length 684
RNA type mRNA
GC content 0.51
exon number 9
gene id AMCG00007375
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 16469467 ~ 16621905 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGGAAATTTCTTAGCCAAAAGCAGACCAAGTTGCCGTGGAAACCTGAGACCAGGACCACGGTGAAGAAGCTTGCTGTAGCCCCGAAATGGAAAAACTATGGTCTCCGAATCTTCGGCTACCTTCACCCTTACAAAGACGGCGATTTCCAGTTTGCTGTCGCCTCCGATGACAACTCTGAGTTTTGGCTGAGCTCCGATGAGAGCCCTCTCAATGCCAGGCTGCTGGTGTACGTTGGAAAGtaCCTCAGGAGCTCAGttgaaaccaatttgaaatggcCCTCATTCGTGTGCAGGAGCCCCACAttgGGTACCGAGTGGACTGCTCCAGGGGAATTCAGCAAGTTCAGATCCCAGTCCTCCAAGCCTGTCCACCTAATTTCTTCCAGACGGTACTATTTTGAAGTTCTGCACAAACAAGATGACAAGGGTTCAGACCACATTGAAGTTGGGtggCGTCCTTTCCTACCAGGCCTGAAGTTTGAAGTCATTGACACTACATACATCTCCTTATACACAGaagcTGGAACACTGAGCAACCTCAGCAGCTCAGAGTGCGAGGGGAAACAAAACACCCTGGGCAATCCTGAAGAGCTCGGGTGCACTATGACTAATCCGCCCTTGTCTGAGAATCAGGCATCATTGCCTGTGCTGGAGTCGGTGGTTCCTGCTGTTCAGCTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU29252 lncRNA downstream 89176 16378518 ~ 16380291 (-) True G23344
TU29199 lncRNA downstream 170211 16237461 ~ 16299256 (-) False AMCG00007366
TU29198 lncRNA downstream 170211 16291541 ~ 16299256 (-) True AMCG00007366
TU29141 lncRNA downstream 400003 16068083 ~ 16069464 (-) True G23250
TU29111 lncRNA downstream 668515 15734625 ~ 15800952 (-) True G23225
TU29290 lncRNA upstream 130657 16660881 ~ 16662665 (-) True G23379
TU29321 lncRNA upstream 176065 16706289 ~ 16709180 (-) True G23397
TU29362 lncRNA upstream 418228 16948452 ~ 16948745 (-) True G23429
TU29364 lncRNA upstream 433743 16963967 ~ 16964267 (-) True G23431
TU29373 lncRNA upstream 462691 16992915 ~ 16993435 (-) True G23439
AMCG00007373 mRNA downstream 1780 16455533 ~ 16467687 (-) True AMCG00007373
AMCG00007374 mRNA downstream 25354 16385385 ~ 16444113 (-) True AMCG00007374
AMCG00007365 mRNA downstream 123887 16321578 ~ 16345580 (-) True AMCG00007365
AMCG00007366 mRNA downstream 155435 16297002 ~ 16314032 (-) False AMCG00007366
AMCG00007364 mRNA downstream 199090 16269967 ~ 16270377 (-) True AMCG00007364
AMCG00007376 mRNA upstream 135327 16665551 ~ 16670635 (-) True AMCG00007376
AMCG00007380 mRNA upstream 181868 16712092 ~ 16732845 (-) True AMCG00007380
AMCG00007384 mRNA upstream 441078 16971302 ~ 16978773 (-) True AMCG00007384
AMCG00007387 mRNA upstream 519492 17049716 ~ 17058918 (-) True AMCG00007387
AMCG00007386 mRNA upstream 619948 17150172 ~ 17168177 (-) True AMCG00007386
TU29239 other downstream 146816 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other downstream 146816 16321037 ~ 16322651 (-) False AMCG00007365
TU28749 other downstream 2523402 13945643 ~ 13946065 (-) True G22931
TU28633 other downstream 3117394 13351517 ~ 13352073 (-) True G22838
TU28289 other downstream 6279263 10187314 ~ 10190204 (-) False AMCG00007289
TU29633 other upstream 1525246 18055470 ~ 18058949 (-) True G23661
TU29846 other upstream 2246136 18776360 ~ 18777638 (-) True G23838
TU30203 other upstream 3384922 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 3801289 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 3940887 20471111 ~ 20472704 (-) True AMCG00007500

Expression Profile