Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007436 |
| length | 516 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 5 |
| gene id | AMCG00007436 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 18619308 ~ 18621844 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0048478 | replication fork protection | biological_process |
| GO:0000076 | DNA replication checkpoint | biological_process |
| GO:0031573 | intra-S DNA damage checkpoint | biological_process |
| GO:0044770 | cell cycle phase transition | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K10904 | TIPIN; TIMELESS-interacting protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU29783 | lncRNA | upstream | 30240 | 18588866 ~ 18589068 (+) | True | G23782 |
| TU29782 | lncRNA | upstream | 30618 | 18588016 ~ 18588690 (+) | True | G23781 |
| TU29781 | lncRNA | upstream | 32772 | 18586174 ~ 18586536 (+) | True | G23780 |
| TU29687 | lncRNA | upstream | 394372 | 18222183 ~ 18224936 (+) | False | AMCG00007414 |
| TU29673 | lncRNA | upstream | 414947 | 18202462 ~ 18204361 (+) | True | G23696 |
| TU29795 | lncRNA | downstream | 2077 | 18623921 ~ 18625059 (+) | True | G23791 |
| TU29811 | lncRNA | downstream | 92827 | 18714671 ~ 18719794 (+) | True | G23804 |
| TU29903 | lncRNA | downstream | 382503 | 19004347 ~ 19087472 (+) | True | G23887 |
| TU29906 | lncRNA | downstream | 388870 | 19010714 ~ 19014831 (+) | True | AMCG00007452 |
| TU29916 | lncRNA | downstream | 426242 | 19048086 ~ 19050603 (+) | False | G23891 |
| AMCG00007438 | mRNA | upstream | 22955 | 18590680 ~ 18596353 (+) | True | AMCG00007438 |
| AMCG00007437 | mRNA | upstream | 35032 | 18575842 ~ 18584276 (+) | True | AMCG00007437 |
| AMCG00007433 | mRNA | upstream | 48836 | 18567242 ~ 18570472 (+) | True | AMCG00007433 |
| AMCG00007428 | mRNA | upstream | 216809 | 18397347 ~ 18402499 (+) | True | AMCG00007428 |
| AMCG00007414 | mRNA | upstream | 395723 | 18217730 ~ 18223585 (+) | True | AMCG00007414 |
| AMCG00007440 | mRNA | downstream | 28 | 18621872 ~ 18623043 (+) | True | AMCG00007440 |
| AMCG00007439 | mRNA | downstream | 33722 | 18655566 ~ 18673142 (+) | True | AMCG00007439 |
| AMCG00007444 | mRNA | downstream | 68167 | 18690011 ~ 18712246 (+) | True | AMCG00007444 |
| AMCG00007446 | mRNA | downstream | 128626 | 18750470 ~ 18790088 (+) | True | AMCG00007446 |
| AMCG00007447 | mRNA | downstream | 189011 | 18810855 ~ 18814928 (+) | True | AMCG00007447 |
| TU29768 | other | upstream | 48844 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU29705 | other | upstream | 326970 | 18290108 ~ 18292338 (+) | True | G23724 |
| TU29676 | other | upstream | 411000 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU29675 | other | upstream | 417348 | 18198768 ~ 18201960 (+) | True | AMCG00007417 |
| TU28988 | other | upstream | 3331348 | 15286497 ~ 15287960 (+) | False | AMCG00007352 |
| TU29920 | other | downstream | 429498 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU30494 | other | downstream | 2438557 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU30868 | other | downstream | 3659856 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU31151 | other | downstream | 4567616 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU31514 | other | downstream | 5570377 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
