Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007438 |
| length | 1257 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 10 |
| gene id | AMCG00007438 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 18590680 ~ 18596353 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02930 | RP-L4e, RPL4; large subunit ribosomal protein L4e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU29783 | lncRNA | upstream | 1612 | 18588866 ~ 18589068 (+) | True | G23782 |
| TU29782 | lncRNA | upstream | 1990 | 18588016 ~ 18588690 (+) | True | G23781 |
| TU29781 | lncRNA | upstream | 4144 | 18586174 ~ 18586536 (+) | True | G23780 |
| TU29687 | lncRNA | upstream | 365744 | 18222183 ~ 18224936 (+) | False | AMCG00007414 |
| TU29673 | lncRNA | upstream | 386319 | 18202462 ~ 18204361 (+) | True | G23696 |
| TU29795 | lncRNA | downstream | 27568 | 18623921 ~ 18625059 (+) | True | G23791 |
| TU29811 | lncRNA | downstream | 118318 | 18714671 ~ 18719794 (+) | True | G23804 |
| TU29903 | lncRNA | downstream | 407994 | 19004347 ~ 19087472 (+) | True | G23887 |
| TU29906 | lncRNA | downstream | 414361 | 19010714 ~ 19014831 (+) | True | AMCG00007452 |
| TU29916 | lncRNA | downstream | 451733 | 19048086 ~ 19050603 (+) | False | G23891 |
| AMCG00007437 | mRNA | upstream | 6404 | 18575842 ~ 18584276 (+) | True | AMCG00007437 |
| AMCG00007433 | mRNA | upstream | 20208 | 18567242 ~ 18570472 (+) | True | AMCG00007433 |
| AMCG00007428 | mRNA | upstream | 188181 | 18397347 ~ 18402499 (+) | True | AMCG00007428 |
| AMCG00007414 | mRNA | upstream | 367095 | 18217730 ~ 18223585 (+) | True | AMCG00007414 |
| AMCG00007415 | mRNA | upstream | 373785 | 18209628 ~ 18216895 (+) | True | AMCG00007415 |
| AMCG00007436 | mRNA | downstream | 22955 | 18619308 ~ 18621844 (+) | True | AMCG00007436 |
| AMCG00007440 | mRNA | downstream | 25519 | 18621872 ~ 18623043 (+) | True | AMCG00007440 |
| AMCG00007439 | mRNA | downstream | 59213 | 18655566 ~ 18673142 (+) | True | AMCG00007439 |
| AMCG00007444 | mRNA | downstream | 93658 | 18690011 ~ 18712246 (+) | True | AMCG00007444 |
| AMCG00007446 | mRNA | downstream | 154117 | 18750470 ~ 18790088 (+) | True | AMCG00007446 |
| TU29768 | other | upstream | 20216 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU29705 | other | upstream | 298342 | 18290108 ~ 18292338 (+) | True | G23724 |
| TU29676 | other | upstream | 382372 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU29675 | other | upstream | 388720 | 18198768 ~ 18201960 (+) | True | AMCG00007417 |
| TU28988 | other | upstream | 3302720 | 15286497 ~ 15287960 (+) | False | AMCG00007352 |
| TU29920 | other | downstream | 454989 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU30494 | other | downstream | 2464048 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU30868 | other | downstream | 3685347 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU31151 | other | downstream | 4593107 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU31514 | other | downstream | 5595868 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00026435 | False | 1422 | mRNA | 0.50 | 10 | NC_007129.7 | 19451070 ~ 19456269 (-) |
