RNA id: AMCG00007455


Basic Information

Item Value
RNA id AMCG00007455
length 1215
RNA type mRNA
GC content 0.60
exon number 3
gene id AMCG00007455
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19023898 ~ 19025640 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTAcacctttcctctcctctctgcacCCCTCTCAtcccttctcctctcctcctgtgCAGGTGATGGCTGAGTCTACAGTCCCCTTATTAAACCAGAGAGCCAGCCCAGGCACAGTGGCCTTGCGGTCCTCTGCCTCCCCTGACCCGGCAGGTCACTGGGAGGAGCCATCCTTTACCGTTGCCTCCAAGGTCCGCGTTGTGGCCACTGTGTGCCTGTTCCTGTTCGCTTGTGGCTCCAACTGGGCAGTGCTGGCCAGTGCGGCACGTAAGGGCAGGAAGTCCCCCCTGCGCGTGCTGATCTTGAGCCTGAGCGCAGCCGACTTGCTGGTGACCCTGGTGGTGATGCCTCTGGACACAGTGTGGAACATCACAGTGCAGTGGTATGCGGGCGATGCCGCCTGTAAGCTCCTCAACTTCCTCAAGCTGTTCGCCATGTACTCCTCCTCCCTTGTGCTTGTAGTCATCAGCCTGGATCGCCAGGCCGCCATCCTCCACCCCTTCAGCTTCACCAGCGCCGGACAGCGCAACCGAAACATGCTGGCTGTGGCCTGGGCAGCCAGCGCAGTCCTTGCCTCCCCACAGCTGTTCCTCTTCCACCTGCAGAAGGCTTCAGGCCTGGACTTCACACAGTGCGTCACCATGGGCAGCTTCCAGCAGCACTGGCAGGAGACGCTTTACAACATGTTCACCTTCCTAACCCTCTATGTCATGCCACTTAGCGCCATGGTGGTCTGCTACTCCAGGATCCTCTGGGAGATCAGTCGTCAGATGAAGGAAGACAGAGGCCTGGTGAGGAGCAACAACGACCACTTCTCCAAAGCCAGGATGAAGACCCTGAGGATGACAATTGTAATGGTGGTGTCTTTCATCGTGTGCTGGACGCCCTACTACCTGCTGGGGTTGTGGTACTGGTTCCGGCCCGAGATGCTGCGGGAGATCCCGGAGTACGTCAATCACACCCTGCTCCTATTCGGCCTCCTGCACACCTGCTCTGACCCCGTGGTCTACGGGCTGTACACCCCGTCCTTTCGGGAGGACCTGTACGCATGCTGGGGGCGGTTAGGCTCGGGATTGACCCGGCACAGGCTAGCACACCGGCCCCCCTCCCTGTCCTTCCTCAACGTCCAGGACTATGGTCTGACAGCAGACCTCTCTGTGCACGGCAGTGTGGGGTCCGTCACCTCAAATGGCACAGCAGTCCAAACGGGGTTTTAG

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016500 protein-hormone receptor activity molecular_function

KEGG:

id description
K04280 GNRHR; gonadotropin-releasing hormone receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU29891 lncRNA downstream 122301 18901365 ~ 18901597 (-) True G23875
TU29883 lncRNA downstream 156419 18866767 ~ 18867479 (-) True G23867
TU29867 lncRNA downstream 193811 18829865 ~ 18830087 (-) True G23854
TU29851 lncRNA downstream 238761 18781214 ~ 18785137 (-) True G23843
TU29850 lncRNA downstream 242806 18780837 ~ 18781092 (-) True G23842
TU30035 lncRNA upstream 454374 19480014 ~ 19481087 (-) True G23982
TU30064 lncRNA upstream 554141 19579781 ~ 19579984 (-) True G24003
TU30182 lncRNA upstream 766061 19791701 ~ 19797576 (-) True AMCG00007481
TU30194 lncRNA upstream 842218 19867858 ~ 19912916 (-) True G24102
TU30293 lncRNA upstream 1185379 20211019 ~ 20222004 (-) False AMCG00007494
AMCG00007457 mRNA downstream 806 19020720 ~ 19023092 (-) True AMCG00007457
AMCG00007448 mRNA downstream 200292 18815851 ~ 18823606 (-) True AMCG00007448
AMCG00007449 mRNA downstream 213327 18791578 ~ 18810571 (-) True AMCG00007449
AMCG00007445 mRNA downstream 290879 18714615 ~ 18733019 (-) True AMCG00007445
AMCG00007442 mRNA downstream 389929 18624723 ~ 18633969 (-) True AMCG00007442
AMCG00007454 mRNA upstream 24432 19050072 ~ 19056271 (-) True AMCG00007454
AMCG00007456 mRNA upstream 32617 19058257 ~ 19074146 (-) True AMCG00007456
AMCG00007462 mRNA upstream 61562 19087202 ~ 19101380 (-) True AMCG00007462
AMCG00007461 mRNA upstream 83344 19108984 ~ 19127020 (-) True AMCG00007461
AMCG00007463 mRNA upstream 112200 19137840 ~ 19140452 (-) True AMCG00007463
TU29846 other downstream 246260 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 964949 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 2401993 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2701247 16320997 ~ 16322651 (-) False AMCG00007365
TU30203 other upstream 889506 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1305873 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1445471 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 4946031 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 5240184 24265824 ~ 24267921 (-) False AMCG00007637

Expression Profile