RNA id: AMCG00007457


Basic Information

Item Value
RNA id AMCG00007457
length 822
RNA type mRNA
GC content 0.65
exon number 3
gene id AMCG00007457
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19020720 ~ 19023092 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCGTGTCTCATGTCTAAGGGTCTGCTGGTGTTGCTGGCGGCCGTCTGGGTGCTGGGGGTGTCGGGGAGTGGTGGCGGTGGTGGCCCAGTGGATGGGGGGAGCCTACAGGAACTGCACTGCCCGCCCTGCGAGAGGATTCACTGCACCCCCAAGAGAGCGCTGAAGCTGCAATGCAAGGGGGGCATCACCACGGGCATCTGCGGCTGCTGCCCAGTCTGCGCACGCATGGCAGGGGAGAGCTGCGGGGGCAAGTGGGACTACCTGGGCAAGTGTGACCAGGGACTGGTGTGCATCTACCAGGTCCCCAGCATGGAGGAGGCCAGCGGGGAGCTGAGAGGATCCTGCAAAGAGGtgcTGGACCTGCCGTTGGAGGGGGAGGCCTGCAGGCCCGACTGCACCTGGGACTTCTGCAGAGAGAACCCCTCCGAGGTCTGCTCAGCCAGGACAGTGGGGCTGGAGAAGAGAGAGTGCCAGGGCTCCTGCCAGCACACCACCTGCTCCAGCTGCCTGGTCCTTCGGCAGCCCCAGTGCCGCCAGACCTGTGCGACCTCAGACCTGTCCTGCCTGCGCCACTACGGGAACTGTGTGCGTGATGAGCTGGGGGCGAGTCAGCCGCCCGCATGCCACCACGACCTGCAGGTGAGTACCAGGACCCACACACTGGGAGTTGGGTACCCGGGCACCAAGATCCCAGCTCAGGGCACCTCAGACTCGGACAGGGCTCTCCACCCTGACCCTGTCCAGCTCAGACCCAGCCCAGTCCATATTGATGGAGTACAGCACCATCAGCCCACTGCACACCTCTCCTGCACAGCCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU29891 lncRNA downstream 119123 18901365 ~ 18901597 (-) True G23875
TU29883 lncRNA downstream 153241 18866767 ~ 18867479 (-) True G23867
TU29867 lncRNA downstream 190633 18829865 ~ 18830087 (-) True G23854
TU29851 lncRNA downstream 235583 18781214 ~ 18785137 (-) True G23843
TU29850 lncRNA downstream 239628 18780837 ~ 18781092 (-) True G23842
TU30035 lncRNA upstream 456922 19480014 ~ 19481087 (-) True G23982
TU30064 lncRNA upstream 556689 19579781 ~ 19579984 (-) True G24003
TU30182 lncRNA upstream 768609 19791701 ~ 19797576 (-) True AMCG00007481
TU30194 lncRNA upstream 844766 19867858 ~ 19912916 (-) True G24102
TU30293 lncRNA upstream 1187927 20211019 ~ 20222004 (-) False AMCG00007494
AMCG00007448 mRNA downstream 197114 18815851 ~ 18823606 (-) True AMCG00007448
AMCG00007449 mRNA downstream 210149 18791578 ~ 18810571 (-) True AMCG00007449
AMCG00007445 mRNA downstream 287701 18714615 ~ 18733019 (-) True AMCG00007445
AMCG00007442 mRNA downstream 386751 18624723 ~ 18633969 (-) True AMCG00007442
AMCG00007441 mRNA downstream 406774 18597275 ~ 18613946 (-) True AMCG00007441
AMCG00007455 mRNA upstream 806 19023898 ~ 19025640 (-) True AMCG00007455
AMCG00007454 mRNA upstream 26980 19050072 ~ 19056271 (-) True AMCG00007454
AMCG00007456 mRNA upstream 35165 19058257 ~ 19074146 (-) True AMCG00007456
AMCG00007462 mRNA upstream 64110 19087202 ~ 19101380 (-) True AMCG00007462
AMCG00007461 mRNA upstream 85892 19108984 ~ 19127020 (-) True AMCG00007461
TU29846 other downstream 243082 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 961771 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 2398815 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2698069 16320997 ~ 16322651 (-) False AMCG00007365
TU30203 other upstream 892054 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1308421 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1448019 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 4948579 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 5242732 24265824 ~ 24267921 (-) False AMCG00007637

Expression Profile