RNA id: AMCG00007463


Basic Information

Item Value
RNA id AMCG00007463
length 921
RNA type mRNA
GC content 0.52
exon number 7
gene id AMCG00007463
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19137840 ~ 19140452 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACATTCTACAATGACATTTACCCCTTTTACCCGCAACAAAGGACGGCTTTTATCTTCAACATCAACCAGCTGATCGTCATCCTGGTGTTCCTGGTCTTCGCCTGCAGTTTTATAATCATCCTGCCCGGAATCCGGGGCAAATGGAGGCTGTTCTGGATGTTCCGAGTCCTCTGCAGCCTCTTCATAGGCGTAGTCATCGTAGCTGTGAACTTTACCAGCGACTGGGCCACTGCCAGCATTCAGGCCAACACCACTTACAAGTCCTTCAGCAATGCTATTCTAAATGAGACGATCGACTACAACGAAATGTTCCAGTGGACGGACGACTATGACCAGGACTACAGCGAGGCCCTCGAGAGGGGCCTTCCCAACCCCATCCTATACATTGCGGAGAAGTTCACGCAGGACAGCCCTTGTGGCCTGTACTTCCAGTACCGATACTCTGGACGCTATGCCTCGGCCACCATGTGGACGGCGTTCTGCTGCTGGCTCGTCTCCAATGTGCTGTTCTCCATGCCAGTGCTAATGTATGCAGGCTACATGATGGTCACAACTGGAGCATTCATCTTCTTTTCCTTGGCATCGTTCTCCACCATACACAACGTGCCATTCTGCACAATCACCATAGGAACAGTGTCCCTGGAGACTGCCTACAGTGGCTCTTTTTGGTTGTCACTAGCAACAGGCTTGCTGTGCTCACTGATCGGCCTGTCGGTGATCCTCCTGGAGTGTTTAATTCCCGAGAAGATGAGGGCTGCCTTCATCTCCTCAGAGGAGGATGACAGTGAGGACCTGTGTGTGGCTGAAGGCTTCCTCAATGCCAGCTTCCTGGAAAGAGAGACCTCTTTACAGCTAGGAGATGTCAGCTGGACTCAAAGACCCGAGCATGGAGATAGCGTCAAAAGCAACAGATGCTGA

Function

GO: NA

KEGG:

id description
K17232 DUOXA2; dual oxidase maturation factor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU29891 lncRNA downstream 236243 18901365 ~ 18901597 (-) True G23875
TU29883 lncRNA downstream 270361 18866767 ~ 18867479 (-) True G23867
TU29867 lncRNA downstream 307753 18829865 ~ 18830087 (-) True G23854
TU29851 lncRNA downstream 352703 18781214 ~ 18785137 (-) True G23843
TU29850 lncRNA downstream 356748 18780837 ~ 18781092 (-) True G23842
TU30035 lncRNA upstream 339562 19480014 ~ 19481087 (-) True G23982
TU30064 lncRNA upstream 439329 19579781 ~ 19579984 (-) True G24003
TU30182 lncRNA upstream 651249 19791701 ~ 19797576 (-) True AMCG00007481
TU30194 lncRNA upstream 727406 19867858 ~ 19912916 (-) True G24102
TU30293 lncRNA upstream 1070567 20211019 ~ 20222004 (-) False AMCG00007494
AMCG00007461 mRNA downstream 10820 19108984 ~ 19127020 (-) True AMCG00007461
AMCG00007462 mRNA downstream 36460 19087202 ~ 19101380 (-) True AMCG00007462
AMCG00007456 mRNA downstream 63694 19058257 ~ 19074146 (-) True AMCG00007456
AMCG00007454 mRNA downstream 81569 19050072 ~ 19056271 (-) True AMCG00007454
AMCG00007455 mRNA downstream 112200 19023898 ~ 19025640 (-) True AMCG00007455
AMCG00007460 mRNA upstream 28362 19168814 ~ 19179046 (-) True AMCG00007460
AMCG00007459 mRNA upstream 42147 19182599 ~ 19187092 (-) True AMCG00007459
AMCG00007470 mRNA upstream 342160 19482612 ~ 19512979 (-) True AMCG00007470
AMCG00007471 mRNA upstream 439966 19580418 ~ 19583227 (-) True AMCG00007471
AMCG00007475 mRNA upstream 462643 19603095 ~ 19622942 (-) True AMCG00007475
TU29846 other downstream 360202 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 1078891 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 2515935 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2815189 16320997 ~ 16322651 (-) False AMCG00007365
TU30203 other upstream 774694 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1191061 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1330659 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 4831219 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 5125372 24265824 ~ 24267921 (-) False AMCG00007637

Expression Profile