RNA id: AMCG00007465



Basic Information


Item Value
RNA id AMCG00007465
length 465
RNA type mRNA
GC content 0.51
exon number 4
gene id AMCG00007465
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19218790 ~ 19236741 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAATATCAGAAATATCTGACTGTTCTGCAGATGGCTTTGGGAGTGACTGCCTCAAACAGGAACAATCTCCTTCCTTACAAAAGACGAATGTGGGTAACTCCAAGCTCAGACACCGCCAATGCAGCTGCCTCCTCTGGGAGCCAGGGTAAACCTTCCCTCAGACGAATCAAAGGCCGAATCCACAGAAGCAAAAGCCTGGACAGCATTGAGCTTCTGGACTCCAATATGCCCACCAACCCTCCTGTGCAGTGTGGTGAGTCAGTCCCACCTTCCCCCAATACTCAACAGACCTTCGTGCACCAGGAGTTGGACAAAGGATATCTGGACCTGACCTCCGAGTCATTCAAGCCCAACTCTGCAGACAAACTGCTGACCTGCGGGTTCTGCACAGTGTGTGATCAATACCAAGAGGAGAATATCCAGGTCAGGAAGAAGAGCCCCACACACCGCACCTGCAAATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29914 lncRNA upstream 106465 19049249 ~ 19112325 (+) False G23891
TU30099 lncRNA downstream 392563 19629304 ~ 19630607 (+) True G24030
TU30112 lncRNA downstream 413915 19650656 ~ 19650874 (+) True G24040
TU30167 lncRNA downstream 562744 19799485 ~ 19799952 (+) True G24083
TU30169 lncRNA downstream 566112 19802853 ~ 19803466 (+) True G24085
TU30172 lncRNA downstream 579054 19815795 ~ 19818345 (+) True G24088
AMCG00007466 mRNA upstream 24445 19190746 ~ 19194345 (+) True AMCG00007466
AMCG00007464 mRNA upstream 36556 19179795 ~ 19182234 (+) True AMCG00007464
AMCG00007458 mRNA upstream 51758 19143133 ~ 19167032 (+) True AMCG00007458
AMCG00007453 mRNA upstream 171031 19032084 ~ 19047759 (+) True AMCG00007453
AMCG00007452 mRNA upstream 203891 19007550 ~ 19014899 (+) False AMCG00007452
AMCG00007467 mRNA downstream 66368 19303109 ~ 19338989 (+) True AMCG00007467
AMCG00007469 mRNA downstream 205716 19442457 ~ 19451469 (+) True AMCG00007469
AMCG00007468 mRNA downstream 226815 19463556 ~ 19479089 (+) True AMCG00007468
AMCG00007472 mRNA downstream 343673 19580414 ~ 19590900 (+) True AMCG00007472
AMCG00007473 mRNA downstream 355680 19592421 ~ 19602959 (+) True AMCG00007473
TU29920 other upstream 162657 19051342 ~ 19056133 (+) True G23893
TU29768 other upstream 648326 18567769 ~ 18570464 (+) False AMCG00007433
TU29705 other upstream 926452 18290108 ~ 18292338 (+) True G23724
TU29676 other upstream 1010482 18207078 ~ 18208308 (+) True G23698
TU29675 other upstream 1016830 18198768 ~ 18201960 (+) True AMCG00007417
TU30494 other downstream 1823660 21060401 ~ 21066783 (+) False AMCG00007514
TU30868 other downstream 3044959 22281700 ~ 22282958 (+) True G24606
TU31151 other downstream 3952719 23189460 ~ 23193521 (+) True G24824
TU31514 other downstream 4955480 24192221 ~ 24194481 (+) True AMCG00007631
TU32400 other downstream 8847081 28083822 ~ 28094741 (+) True G25822

Expression Profile