RNA id: AMCG00007466



Basic Information


Item Value
RNA id AMCG00007466
length 522
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00007466
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19190746 ~ 19194345 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTCGGTGGGGCGACTAAAATGTGGTTCAGCAAAATACAGAGACCAGAGAAGAAGCAATCGGGCAAGAGGAAGAGGTGGACTGCCAAGATCCTGAGGAAGCACAGGGAGAGGATTCTGAAGGATCTGGACGTGAACAAGGTGCTGCCGTACTTGGTTTATGATAAGGTGTTCTCCCTGGGGGAGTACAAAGAGATTTTGGGGTACGATGCTCAGAGGAAAAGGGCTGAAATATTCCTGGATTTGCTCTCTGCAAAAGGTCCCAATGCTTTCTGCGCcttctgttctgttttggaGGAGGTCTGCCCTCACTTGCTTACCTGTTTTTTACTGGAATGTGAAGAACGTGTCCCTGTGGTGAAGAACTCATCGGGGAAACACAAGAAAGGGGCGGCAGCCATGCCCCCGCACAATCAGGATCACTTCCAGCAGGCGGAGCGAGATGTGGTGCCGCCTTCCTCTATCATCACCGTGGGCGAGTCCTACTTCGAACCCAGGTACGTGTCAGAATCGAATGTCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29914 lncRNA upstream 78421 19049249 ~ 19112325 (+) False G23891
TU30099 lncRNA downstream 434959 19629304 ~ 19630607 (+) True G24030
TU30112 lncRNA downstream 456311 19650656 ~ 19650874 (+) True G24040
TU30167 lncRNA downstream 605140 19799485 ~ 19799952 (+) True G24083
TU30169 lncRNA downstream 608508 19802853 ~ 19803466 (+) True G24085
TU30172 lncRNA downstream 621450 19815795 ~ 19818345 (+) True G24088
AMCG00007464 mRNA upstream 8512 19179795 ~ 19182234 (+) True AMCG00007464
AMCG00007458 mRNA upstream 23714 19143133 ~ 19167032 (+) True AMCG00007458
AMCG00007453 mRNA upstream 142987 19032084 ~ 19047759 (+) True AMCG00007453
AMCG00007452 mRNA upstream 175847 19007550 ~ 19014899 (+) False AMCG00007452
AMCG00007451 mRNA upstream 218542 18939265 ~ 18972204 (+) True AMCG00007451
AMCG00007465 mRNA downstream 24445 19218790 ~ 19236741 (+) True AMCG00007465
AMCG00007467 mRNA downstream 108764 19303109 ~ 19338989 (+) True AMCG00007467
AMCG00007469 mRNA downstream 248112 19442457 ~ 19451469 (+) True AMCG00007469
AMCG00007468 mRNA downstream 269211 19463556 ~ 19479089 (+) True AMCG00007468
AMCG00007472 mRNA downstream 386069 19580414 ~ 19590900 (+) True AMCG00007472
TU29920 other upstream 134613 19051342 ~ 19056133 (+) True G23893
TU29768 other upstream 620282 18567769 ~ 18570464 (+) False AMCG00007433
TU29705 other upstream 898408 18290108 ~ 18292338 (+) True G23724
TU29676 other upstream 982438 18207078 ~ 18208308 (+) True G23698
TU29675 other upstream 988786 18198768 ~ 18201960 (+) True AMCG00007417
TU30494 other downstream 1866056 21060401 ~ 21066783 (+) False AMCG00007514
TU30868 other downstream 3087355 22281700 ~ 22282958 (+) True G24606
TU31151 other downstream 3995115 23189460 ~ 23193521 (+) True G24824
TU31514 other downstream 4997876 24192221 ~ 24194481 (+) True AMCG00007631
TU32400 other downstream 8889477 28083822 ~ 28094741 (+) True G25822

Expression Profile