Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007538 |
| length | 1230 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | AMCG00007538 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 21984244 ~ 22007621 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0046835 | carbohydrate phosphorylation | biological_process |
| GO:0006012 | galactose metabolic process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004335 | galactokinase activity | molecular_function |
| id | description |
|---|---|
| K18674 | GALK2; N-acetylgalactosamine kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30569 | lncRNA | upstream | 586197 | 21386225 ~ 21398047 (+) | True | G24384 |
| TU30470 | lncRNA | upstream | 1103320 | 20880546 ~ 20880924 (+) | True | G24311 |
| TU30469 | lncRNA | upstream | 1107459 | 20876584 ~ 20876785 (+) | True | G24310 |
| TU30397 | lncRNA | upstream | 1490239 | 20492904 ~ 20494005 (+) | True | G24256 |
| TU30401 | lncRNA | upstream | 1491627 | 20492396 ~ 20492617 (+) | True | G24258 |
| TU30809 | lncRNA | downstream | 124414 | 22132035 ~ 22134704 (+) | False | AMCG00007547 |
| TU30811 | lncRNA | downstream | 137218 | 22144839 ~ 22147346 (+) | True | G24570 |
| TU30812 | lncRNA | downstream | 137218 | 22144839 ~ 22148238 (+) | False | G24570 |
| TU30852 | lncRNA | downstream | 181624 | 22189245 ~ 22203939 (+) | False | AMCG00007554 |
| TU30854 | lncRNA | downstream | 181624 | 22189245 ~ 22203939 (+) | False | AMCG00007554 |
| AMCG00007532 | mRNA | upstream | 177187 | 21803173 ~ 21807057 (+) | True | AMCG00007532 |
| AMCG00007534 | mRNA | upstream | 183592 | 21781383 ~ 21800652 (+) | True | AMCG00007534 |
| AMCG00007533 | mRNA | upstream | 224061 | 21755790 ~ 21760183 (+) | True | AMCG00007533 |
| AMCG00007531 | mRNA | upstream | 266218 | 21699051 ~ 21718026 (+) | True | AMCG00007531 |
| AMCG00007528 | mRNA | upstream | 544958 | 21400786 ~ 21439286 (+) | True | AMCG00007528 |
| AMCG00007536 | mRNA | downstream | 25621 | 22033242 ~ 22033908 (+) | True | AMCG00007536 |
| AMCG00007537 | mRNA | downstream | 42660 | 22050281 ~ 22052621 (+) | True | AMCG00007537 |
| AMCG00007548 | mRNA | downstream | 116026 | 22123647 ~ 22129477 (+) | True | AMCG00007548 |
| AMCG00007547 | mRNA | downstream | 123952 | 22131573 ~ 22134714 (+) | True | AMCG00007547 |
| AMCG00007546 | mRNA | downstream | 146056 | 22153677 ~ 22158549 (+) | True | AMCG00007546 |
| TU30494 | other | upstream | 917461 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU29920 | other | upstream | 2928111 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU29768 | other | upstream | 3413780 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU29705 | other | upstream | 3691906 | 18290108 ~ 18292338 (+) | True | G23724 |
| TU29676 | other | upstream | 3775936 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU30868 | other | downstream | 274079 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU31151 | other | downstream | 1181839 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU31514 | other | downstream | 2184600 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU32400 | other | downstream | 6076201 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU32501 | other | downstream | 6445388 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
