Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007560 |
| length | 1059 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | AMCG00007560 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 22296054 ~ 22307259 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K09454 | GABPB; GA-binding protein transcription factor, beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30862 | lncRNA | upstream | 29645 | 22263841 ~ 22266409 (+) | False | AMCG00007553 |
| TU30852 | lncRNA | upstream | 92115 | 22189245 ~ 22203939 (+) | False | AMCG00007554 |
| TU30854 | lncRNA | upstream | 92115 | 22189245 ~ 22203939 (+) | False | AMCG00007554 |
| TU30853 | lncRNA | upstream | 92115 | 22191380 ~ 22203939 (+) | True | AMCG00007554 |
| TU30812 | lncRNA | upstream | 147816 | 22144839 ~ 22148238 (+) | False | G24570 |
| TU30934 | lncRNA | downstream | 33477 | 22340736 ~ 22343616 (+) | False | G24654 |
| TU30935 | lncRNA | downstream | 33477 | 22340736 ~ 22342563 (+) | True | G24654 |
| TU30982 | lncRNA | downstream | 142848 | 22450107 ~ 22450404 (+) | True | G24692 |
| TU30983 | lncRNA | downstream | 146557 | 22453816 ~ 22454055 (+) | True | G24693 |
| TU30985 | lncRNA | downstream | 148007 | 22455266 ~ 22456761 (+) | True | G24695 |
| AMCG00007556 | mRNA | upstream | 21875 | 22268514 ~ 22274179 (+) | True | AMCG00007556 |
| AMCG00007553 | mRNA | upstream | 29768 | 22263520 ~ 22266286 (+) | True | AMCG00007553 |
| AMCG00007557 | mRNA | upstream | 34201 | 22232527 ~ 22261853 (+) | True | AMCG00007557 |
| AMCG00007555 | mRNA | upstream | 79814 | 22204776 ~ 22216240 (+) | True | AMCG00007555 |
| AMCG00007554 | mRNA | upstream | 92103 | 22191403 ~ 22203951 (+) | False | AMCG00007554 |
| AMCG00007559 | mRNA | downstream | 15465 | 22322724 ~ 22331465 (+) | True | AMCG00007559 |
| AMCG00007561 | mRNA | downstream | 46353 | 22353612 ~ 22364194 (+) | True | AMCG00007561 |
| AMCG00007562 | mRNA | downstream | 101669 | 22408928 ~ 22431845 (+) | True | AMCG00007562 |
| AMCG00007563 | mRNA | downstream | 134736 | 22441995 ~ 22448954 (+) | True | AMCG00007563 |
| AMCG00007569 | mRNA | downstream | 155847 | 22463106 ~ 22474401 (+) | True | AMCG00007569 |
| TU30868 | other | upstream | 13096 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU30494 | other | upstream | 1229271 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU29920 | other | upstream | 3239921 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU29768 | other | upstream | 3725590 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU29705 | other | upstream | 4003716 | 18290108 ~ 18292338 (+) | True | G23724 |
| TU31151 | other | downstream | 882201 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU31514 | other | downstream | 1884962 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU32400 | other | downstream | 5776563 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU32501 | other | downstream | 6145750 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32711 | other | downstream | 6695836 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
