RNA id: AMCG00007618


Basic Information

Item Value
RNA id AMCG00007618
length 1320
RNA type mRNA
GC content 0.58
exon number 8
gene id AMCG00007618
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24048234 ~ 24051827 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGGCACCAAACTCTCTCAACATGAAGCAGCCGCCGATCCAGTCCACGGCCGGGGCTGTGCCGGTCCGCAATGAAAAAGGCGAGATCTCCATGGAGAAGGTGAAGGTGAAACGCTATGTGTCGGGGAAGCGGCCGGACTACGCCCCCATGGAGTCCTCAgacgaggaggatgaggatttCCAGTTCATGAAGAAGGGCAAGGAGGCCGAGCCTGAGGTGGAACTGGAGGAGGAGGACCTGTCAGACCCCCGACTACGGCGCTTGCTGAACCGCGTGAGCGAGGATGTGGAGGAGAGGCTGGCGAGGCACAGGCAGATTGCAGAGCCAgaggtggtggtggagagcagcGAGGAGTCGGACGATGAGGGCTGGCATCCAGACCGAGAGGAGAGcagtgaggaggaagaggaggaggaggtcgATGATGAGGAAATCGAGAGGCGGCGAGCCATGATGCGCCAGCGAGCACAGGAGCGCAAGACAGAGGACATGGAGCTgatggaggtggaggaggagggcaaATCGGGAGAGGAGTCTGAGTCTGAGTCGGAGTACGAGGAATACACAGACAGCGAGGACGAGGCTGAGCCGCGCCTCAAACCTGTCTTCATCCGCAAGAAGGATCGCGTGACGGTGGCCGAGCGCGAGGCGGAGGAGCTGAAGCAGAAGGAGTTGGAGGTCGAGGCTAAGAAGCAGGTGGAGGAGCGGCGGCGCTACACCCTGAAGATCGTGGAGGAGGAGGCCAAGAAGGAGTTTGAGGAGAACCGGCGCACACTGGCCGCACTCGATGCCCTCGACACGGACGGAGAGAACGAGGAGGAGGAGTACGAGGCCTGGAAGGTCCGGGAGCTCAAGCGCATCAAGCGAGATCGCGAGGCCCGGGAAGCCTTGGAGAAGGAGAAGGCGGAGATCGATCGCTTCCACAATCTCACAGAGGAAGAGCGCAGAGCTGAGCTGCGGTCCAACGGCAAAGTTGTCACCAACAAGGCCTCCAAGGGCAAATACAAATTCCTGCAGAAATACTACCATAGAGGGGCCTTCTTCATGGATGAGGAGCAGGATGTGTTCAAGAGAGATTTCAGCGCCCCCACTCTGGAGGACCACTTCAACAAGACCATCCTCCCCAAAGTTATGCAGgTCAAAAACTTTGGACGGTCTGGGCGCACTAAATACACACACTTGGTGGATCAGGATACCACTTCCTTTGACTCGGCCTGGGCTCAGGAGAGTGCTCAGAATAGCAAGTTCTTCAAGCAGAAGGCTGGGGGTGTGCGAGATGTGTTTGACAGGCCCTGTGTTAAAAAGAGGAAGACCTGA

Function

GO: NA

KEGG:

id description
K13110 MFAP1; microfibrillar-associated protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU31444 lncRNA upstream 1625 24044989 ~ 24046609 (+) True G25069
TU31428 lncRNA upstream 16930 24031034 ~ 24031304 (+) True G25056
TU31374 lncRNA upstream 122080 23924239 ~ 23926154 (+) True G25013
TU31372 lncRNA upstream 125009 23921920 ~ 23923225 (+) True G25011
TU31358 lncRNA upstream 184441 23860682 ~ 23863793 (+) True G24997
TU31459 lncRNA downstream 33580 24085407 ~ 24087304 (+) True G25084
TU31480 lncRNA downstream 98516 24150343 ~ 24153848 (+) True G25103
TU31520 lncRNA downstream 159855 24211682 ~ 24213444 (+) True G25134
TU31525 lncRNA downstream 176809 24228636 ~ 24228910 (+) True G25138
TU31536 lncRNA downstream 202963 24254790 ~ 24255913 (+) True G25148
AMCG00007620 mRNA upstream 3833 24041906 ~ 24044401 (+) True AMCG00007620
AMCG00007621 mRNA upstream 31621 24013330 ~ 24016613 (+) True AMCG00007621
AMCG00007619 mRNA upstream 40924 23997437 ~ 24007310 (+) True AMCG00007619
AMCG00007616 mRNA upstream 53569 23987746 ~ 23994665 (+) True AMCG00007616
AMCG00007617 mRNA upstream 62466 23979414 ~ 23985768 (+) True AMCG00007617
AMCG00007622 mRNA downstream 4369 24056196 ~ 24077348 (+) True AMCG00007622
AMCG00007631 mRNA downstream 140465 24192292 ~ 24194481 (+) False AMCG00007631
AMCG00007633 mRNA downstream 177695 24229522 ~ 24230585 (+) True AMCG00007633
AMCG00007632 mRNA downstream 204319 24256146 ~ 24261899 (+) True AMCG00007632
AMCG00007636 mRNA downstream 284734 24336561 ~ 24349947 (+) True AMCG00007636
TU31151 other upstream 854713 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 1765276 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 2981451 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 4992101 19051342 ~ 19056133 (+) True G23893
TU29768 other upstream 5477770 18567769 ~ 18570464 (+) False AMCG00007433
TU31514 other downstream 140394 24192221 ~ 24194481 (+) True AMCG00007631
TU32400 other downstream 4031995 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 4401182 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 4951268 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 5714001 29765828 ~ 29775035 (+) False G26258

Expression Profile