Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007620 |
| length | 540 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | AMCG00007620 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 24041906 ~ 24044401 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0008081 | phosphoric diester hydrolase activity | molecular_function |
| id | description |
|---|---|
| K21138 | HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31428 | lncRNA | upstream | 10602 | 24031034 ~ 24031304 (+) | True | G25056 |
| TU31374 | lncRNA | upstream | 115752 | 23924239 ~ 23926154 (+) | True | G25013 |
| TU31372 | lncRNA | upstream | 118681 | 23921920 ~ 23923225 (+) | True | G25011 |
| TU31358 | lncRNA | upstream | 178113 | 23860682 ~ 23863793 (+) | True | G24997 |
| TU31352 | lncRNA | upstream | 190004 | 23845504 ~ 23851902 (+) | True | G24992 |
| TU31444 | lncRNA | downstream | 588 | 24044989 ~ 24046609 (+) | True | G25069 |
| TU31459 | lncRNA | downstream | 41006 | 24085407 ~ 24087304 (+) | True | G25084 |
| TU31480 | lncRNA | downstream | 105942 | 24150343 ~ 24153848 (+) | True | G25103 |
| TU31520 | lncRNA | downstream | 167281 | 24211682 ~ 24213444 (+) | True | G25134 |
| TU31525 | lncRNA | downstream | 184235 | 24228636 ~ 24228910 (+) | True | G25138 |
| AMCG00007621 | mRNA | upstream | 25293 | 24013330 ~ 24016613 (+) | True | AMCG00007621 |
| AMCG00007619 | mRNA | upstream | 34596 | 23997437 ~ 24007310 (+) | True | AMCG00007619 |
| AMCG00007616 | mRNA | upstream | 47241 | 23987746 ~ 23994665 (+) | True | AMCG00007616 |
| AMCG00007617 | mRNA | upstream | 56138 | 23979414 ~ 23985768 (+) | True | AMCG00007617 |
| AMCG00007613 | mRNA | upstream | 64306 | 23969841 ~ 23977600 (+) | True | AMCG00007613 |
| AMCG00007618 | mRNA | downstream | 3833 | 24048234 ~ 24051827 (+) | True | AMCG00007618 |
| AMCG00007622 | mRNA | downstream | 11795 | 24056196 ~ 24077348 (+) | True | AMCG00007622 |
| AMCG00007631 | mRNA | downstream | 147891 | 24192292 ~ 24194481 (+) | False | AMCG00007631 |
| AMCG00007633 | mRNA | downstream | 185121 | 24229522 ~ 24230585 (+) | True | AMCG00007633 |
| AMCG00007632 | mRNA | downstream | 211745 | 24256146 ~ 24261899 (+) | True | AMCG00007632 |
| TU31151 | other | upstream | 848385 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU30868 | other | upstream | 1758948 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU30494 | other | upstream | 2975123 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU29920 | other | upstream | 4985773 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU29768 | other | upstream | 5471442 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU31514 | other | downstream | 147820 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU32400 | other | downstream | 4039421 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU32501 | other | downstream | 4408608 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32711 | other | downstream | 4958694 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32939 | other | downstream | 5721427 | 29765828 ~ 29775035 (+) | False | G26258 |
