Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007621 |
| length | 1131 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 9 |
| gene id | AMCG00007621 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 24013330 ~ 24016613 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006413 | translational initiation | biological_process |
| GO:0071951 | conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | biological_process |
| GO:0004479 | methionyl-tRNA formyltransferase activity | molecular_function |
| id | description |
|---|---|
| K00604 | MTFMT, fmt; methionyl-tRNA formyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31374 | lncRNA | upstream | 87176 | 23924239 ~ 23926154 (+) | True | G25013 |
| TU31372 | lncRNA | upstream | 90105 | 23921920 ~ 23923225 (+) | True | G25011 |
| TU31358 | lncRNA | upstream | 149537 | 23860682 ~ 23863793 (+) | True | G24997 |
| TU31352 | lncRNA | upstream | 161428 | 23845504 ~ 23851902 (+) | True | G24992 |
| TU31291 | lncRNA | upstream | 343263 | 23667363 ~ 23670067 (+) | False | AMCG00007604 |
| TU31428 | lncRNA | downstream | 14421 | 24031034 ~ 24031304 (+) | True | G25056 |
| TU31444 | lncRNA | downstream | 28376 | 24044989 ~ 24046609 (+) | True | G25069 |
| TU31459 | lncRNA | downstream | 68794 | 24085407 ~ 24087304 (+) | True | G25084 |
| TU31480 | lncRNA | downstream | 133730 | 24150343 ~ 24153848 (+) | True | G25103 |
| TU31520 | lncRNA | downstream | 195069 | 24211682 ~ 24213444 (+) | True | G25134 |
| AMCG00007619 | mRNA | upstream | 6020 | 23997437 ~ 24007310 (+) | True | AMCG00007619 |
| AMCG00007616 | mRNA | upstream | 18665 | 23987746 ~ 23994665 (+) | True | AMCG00007616 |
| AMCG00007617 | mRNA | upstream | 27562 | 23979414 ~ 23985768 (+) | True | AMCG00007617 |
| AMCG00007613 | mRNA | upstream | 35730 | 23969841 ~ 23977600 (+) | True | AMCG00007613 |
| AMCG00007614 | mRNA | upstream | 52416 | 23942711 ~ 23960914 (+) | True | AMCG00007614 |
| AMCG00007620 | mRNA | downstream | 25293 | 24041906 ~ 24044401 (+) | True | AMCG00007620 |
| AMCG00007618 | mRNA | downstream | 31621 | 24048234 ~ 24051827 (+) | True | AMCG00007618 |
| AMCG00007622 | mRNA | downstream | 39583 | 24056196 ~ 24077348 (+) | True | AMCG00007622 |
| AMCG00007631 | mRNA | downstream | 175679 | 24192292 ~ 24194481 (+) | False | AMCG00007631 |
| AMCG00007633 | mRNA | downstream | 212909 | 24229522 ~ 24230585 (+) | True | AMCG00007633 |
| TU31151 | other | upstream | 819809 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU30868 | other | upstream | 1730372 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU30494 | other | upstream | 2946547 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU29920 | other | upstream | 4957197 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU29768 | other | upstream | 5442866 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU31514 | other | downstream | 175608 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU32400 | other | downstream | 4067209 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU32501 | other | downstream | 4436396 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32711 | other | downstream | 4986482 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32939 | other | downstream | 5749215 | 29765828 ~ 29775035 (+) | False | G26258 |
