RNA id: AMCG00007633



Basic Information


Item Value
RNA id AMCG00007633
length 339
RNA type mRNA
GC content 0.54
exon number 3
gene id AMCG00007633
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24229522 ~ 24230585 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGAGCTCCAGACTGTGGATGAGAGTCGTGGTTTGTGCCGTGTTGCTGTCCGTCGTCTGCGGTGCTGAAACTAACGACTTGGAGGAAAGAGCCTTGACGGACTTCTACCCCAAGGATCCAACCCTGAACAACGAAAAACAGCTGCTTGGCGCTCTACAAGAAGTCCTGGAAAAGCTACAGAGTAAACGGATTCCAGCGTGGGAAAAGAAATTCGGACAAGTTCCCACGTGCGATGTGGGAGAGCAGTGTGCGGTCAGGAAAGGCGCTCGGATCGGCAAGATGTGCGACTGCCCGCGCGGGGCGTTCTGCAACTTTTTCCTGCTGAAGTGCTTGTGA

Function


GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0009267 cellular response to starvation biological_process
GO:0032099 negative regulation of appetite biological_process
GO:0000186 activation of MAPKK activity biological_process
GO:0008343 adult feeding behavior biological_process
GO:0001678 cellular glucose homeostasis biological_process
GO:0005615 extracellular space cellular_component

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31525 lncRNA upstream 612 24228636 ~ 24228910 (+) True G25138
TU31520 lncRNA upstream 16078 24211682 ~ 24213444 (+) True G25134
TU31480 lncRNA upstream 75674 24150343 ~ 24153848 (+) True G25103
TU31459 lncRNA upstream 142218 24085407 ~ 24087304 (+) True G25084
TU31444 lncRNA upstream 182913 24044989 ~ 24046609 (+) True G25069
TU31536 lncRNA downstream 24205 24254790 ~ 24255913 (+) True G25148
TU31598 lncRNA downstream 210712 24441297 ~ 24469767 (+) True G25196
TU31599 lncRNA downstream 240454 24471039 ~ 24473147 (+) True G25197
TU31605 lncRNA downstream 245902 24476487 ~ 24499589 (+) False AMCG00007640
TU31607 lncRNA downstream 253701 24484286 ~ 24490421 (+) False G25203
AMCG00007631 mRNA upstream 35041 24192292 ~ 24194481 (+) False AMCG00007631
AMCG00007622 mRNA upstream 152174 24056196 ~ 24077348 (+) True AMCG00007622
AMCG00007618 mRNA upstream 177695 24048234 ~ 24051827 (+) True AMCG00007618
AMCG00007620 mRNA upstream 185121 24041906 ~ 24044401 (+) True AMCG00007620
AMCG00007621 mRNA upstream 212909 24013330 ~ 24016613 (+) True AMCG00007621
AMCG00007632 mRNA downstream 25561 24256146 ~ 24261899 (+) True AMCG00007632
AMCG00007636 mRNA downstream 105976 24336561 ~ 24349947 (+) True AMCG00007636
AMCG00007638 mRNA downstream 218737 24449322 ~ 24461405 (+) True AMCG00007638
AMCG00007640 mRNA downstream 261317 24491902 ~ 24499650 (+) False AMCG00007640
AMCG00007641 mRNA downstream 291880 24522465 ~ 24536808 (+) True AMCG00007641
TU31514 other upstream 35041 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 1036001 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 1946564 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 3162739 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 5173389 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 3853237 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 4222424 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 4772510 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 5535243 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 11380531 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile