RNA id: AMCG00007651


Basic Information

Item Value
RNA id AMCG00007651
length 7895
RNA type mRNA
GC content 0.48
exon number 23
gene id AMCG00007651
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24629506 ~ 24645364 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGAGTTTTTACAATGGCGTTTTTAAGACAATAAGAAGCAACACGTCACTGTCAttctctttaaatatttaaacgtTCGAAGCGTGTTAAAGTGGGCGGGACTTCAAGCTTTCTGCGATGACTGACCAATAAAGGATGGGCAAAACGATACAGTTAGGGAGAAACTACCAATCACAGCCTGTTTATCATGAGCTCTATCCAATCAGACGTGGAGTGTTGCCGATACGCCCGTCCAATCATCGAGCACCTCTGGCCCAATGAGAGAAGGGTTCATCTAGATTCCAGCCAATGGGAGCAGAGAGGCTGGGCCATCGAATGGGGAGCGCGAAGGGTTTGAGCTGGCTGggggaagaagaagagaaaagatgGCGGCCGCAGAAGAAAGCCTCTAAAGAAAATAACGATTTGTTTTCCTAGGGTTTGATTTTATATTCGTATAGTTTCTTGTTGTATTATAAGTAGTTAAGGATTACTTCATGTTTTTACGATATAGTTAGATTTTAGTAACATTATGTATAGATAGTAGACGATTCGATTAGGTAAACAGCTGTCCGTTTTAAGCTTTTAAAACTCGTCATATAGAAATGGTTTTCTTATATTGAATtgtatatgcttttttttaagaacCTGAAAGATAATTAAATAGTTAGTTGAGCTACCGAGCATCCCTTTTAAAGTATGAAAATTGCTTGGCAAGTTTATAAACAGGGTGCCCGAAATCATGGAATCGAGTCGTAAAAGTACAAGACCTCGAATAAAAGTGATCGCATATCTTTACCGTGGTTTGTGTGCCTGCAAAATCTAATATACCAGTCCGCCGAAAAGCATTGATGATTATATTTGATTTCCgagacattttcaattaatccCAGTTATGGCCTCGTACAACCTGGTTTTCGTGATTGACAGTTCCGAGCCGGGCCGAGCGTCGGGCTCGGACGGAGTCGGTGTCAGACCCCCTCTCCTGACGCAGGGAGTGCTGAAAATCCTGCTGTATTTTGGCTGCAGATTTGGCTTCGATAAGGTCAGGTGGGGGTACAACTTCTTCACCACCCAGGGGAGGCGAGGTGCCGTCTCCCGGACCTCCGATTTCAAAGACCTGCGGGACAAAACCTTCGAGGATTTTGAAGGGGAGTTTCAGGATCGGCTCGAAGAGAAGCCCAGGAGATGTGCAAGCTCAGCTGATGGCCAGCCAGCCTCACACTGGGCCGCATCTGTCCAGACGGCTGTAAAGGAGACTTTGCTGGACTTCCAATGGGACAGGCCGGACATCACCTCCCCCACTAAACTGTCCTTGCGACCGAGGAGAGGGCCGCGGCCTGGCACTAAACTACCCCCTCACCTGGCTTTGACAGAAGAGGACTTGTCAGCTAGGAGCCGGAATGTCCTGTTTCTCGTCTCCAGGTGTCCACACTCAAGGGCCGAGATGGAGCAGTTTCTGTCCCTGGCAGGCAATTGCAGTGATCCATACCAAAAGGCGGTGGAGGGCATTATCCCCAGGGGGCTCCAGGAAATGCTGTTCCACAATAAAGTGGTTCTGCACTGGGTGGACACCACTGAGTACTGCCAGGTGCTGAAAAGTATTGACCATGAAGGTTATGAGATTATATCCAAGGTGCTGAGGCAGGCGGGGGGGAGTGTTCTGCCCCTGGATGCTCTGCTGTGGCTCTCGGACACCAAGCAAAGCAGATGGGCAGAAGTGAGAAGCGGCAGAGAGAAGGATGTACACAGTGGATCACTCCTTCACACCCTTGGGGGTAAAGAAGCTGTCTTTCCCTTAGGCTCCAGTGTCAACTACGTCCTGTCTTCAGAACAGCTGTACCGAGTTGCCTTCCCTGTCCAGCAAGCAACACTAATGTGGGCAGAAGAAGAGAAGACCATCTGCAAAGTTTCACTGGAGCCTGTGTCCTGCAGACAGAAGCTGTGGCCCAGCTCTGTCTGCATATCCCTGAAGGGAACTCTTTTGGACTGGAACGCTCTCACACCCAGGGAGATGAGCTCTGAGTGCTGGGTgctgcaccacacacacaacagtgtgGAACAGAGTCCCGACCCGACTTCATTCCTTCAGCTCCTGACGGAACTCTCTGCACAAGGTCTCCACATGTTTGCCGAGGTCAGGGTGAGTGATGGATACCCTGCCTGTACAGCAGTGCTGTCACCTCTCTCGGCCTGCTCTGGTCTGCTGACCTTGATCCACCCACAGTTTGCTCCTGACAGTGTCCTCCTGTCAACCGAGCGAGTGCCACAAGAGAGCTCAGACCCCTCTTCAGATCTTCCCCATGTTGTTTACAGTGTCCTGAACCACGTTTATGACTTCATGGTGAAGGAAGACGAGAAGGATACTTGCCCTGTCCAGGAAGACATCCCGAATGTCCCAGAATGGGTGCTGCAAGAACTGTCCCAATCCACGTCACACACATCAGATCTTGTTGAGGGCTGGTTTCCTCTGTCTGACCAGTCGGGTGTCAGTTCCAACTTGATGGATTCCATGAgGCTGCTGCATGCTGTGCCTGATGAAGACGAGGAGGTAGTAGGAGAGGATCTAACGGACAGCCTTTCAGAGCTGTACCAAGCAGTGACTACAGAGAACTCTGTTCAGAGAAAAGGCAGGAAGTGTGGTGTCCCCCGCACTCCAGTGAGACAGAAGATGAAGGCGATGAGCCGCTCGCTACAGATGCTGAACGTGGCACGGCTCAATGTGAAGGCTCAGAAGAGCCACGTGGAGGAGACCCAGGCCAGTGAGAGGCCAGTGAGGAAACCGCCCAAGAGACGCTCTGCAGACCGAGACAAGGCCAGCCACAGATCCACAGattttaaaagcGAAGAGGATCTTTTGTCACATCTCAAGGAGAGCTATCAGAAAGCTGTGACCGAAGGATACTCTTTAGTTACCGAAGCCCAGAACTTTCTTGCTCTTATTAAAACATTCCTGAAAGCCTCAGAGCAAGATATTGAGGAGAGTTGTGCAGTTTTCGTCCAGAAGAACCTTCTGAAGTCGAGCAAATCCATTCGACAGCAGTATGGAAGTACAGGAGATGTTGAAACCAAGATTAAAGAGTGTCAAATACAGACCGTGCTGCGGTTGGAGATGTGTCTTCAGTTTCCCACTGTACAGTCTGACTCGGAGCACCTAGAACAGCTGGTGGAGGAGATGACCGATATGCTGCGAATACTCTCCTTAGCCAAAGATCCGGCATACCTCACAAAATTCCTTGAAGAAGAAGTTCTTGCTGTGTACATGACAAGTATTCCCAAGGTCCTTGGGGACATGTATTACAGCCTGGGCACACAGCTGCCCGAGCACTTGGCAGCAGTTCTCCCCTCGGACTTCTTTAGTGACGAGTCCCTTCATCAGGAGAGTGTCTCTCCAACGGCCTCCCAGTTCTCCCTGGCCACCAGCACGGCCTCCACTGGGGGGGAGCGGCTGGAGGACCTGCGCAATAGATCGGCCAAGAAGAAGAGGAGTGGTGTCCTCACCAGACATCGAAGCATGAATGAGGCGTCTCAGGGTCTGCGCCAGATTGAAGTGCCCAGGAAGTCCATGAGAAGGGAGAGTTCCAAGTCTCGTCCTGCAGTGGAGAAGCCTTGTGCAGATCAGTCACCACCTGTAAAAGAGGCAGAACAAGAGGTGACAAAAGTTCGAAGAAACCTCTTCAACCAAGAGATGCTGTCCCCTACGAAGAATGCCAAACTTCCACGGAGCAAGTCAGTGTCAGCGCTGGAAGGATCCAGGCATAAACGCCAAAAGTCAAAAGATGATGTGAATGTTTCAGATCATCACAAACTGCTGACTAAGAAGGTGACGGAAACGCCCCTACACAAGCAGGTGTCTAACCGATATCTGCAGAGGCAGATGATAGGACGGAAATCGGAAACCTCTGATGTATGCATTGTGGAGGAGTCCCCTGAAAAAACTGCAGCCGTGACGGATTTGAGGAGGAGCCCAAGGATTAATAGGTTGTCCTTAAGCAGAAGGCATTCCAGCTCCTTTTACTCCAGCTCCCAGCCTCGATCTCGCAACCTGGAGAGAATCCACTCCTCCTCCCAGCTTGCCCTGAGTGACAGCAAAGCAGGTACCATGGATGTTCGGACTATTCGGTCTCCCGTGCGACTGCTGTTTGGAGCAGCTCGCTCCCCTAGCGAATCTTCCTCTTCATGGTCCTGCGGGGGAAGAAGGTCTGGGAGGCTGCATCCAGGCTCGGCAGCATCCAAAGTGTATGAGagTCCAAATAAAAGTCCTCGGAAAACTCCCAGGAAAACtcctcaaaaacaaaactacgTTGTAAGGAGTAGCAGGACACCCCATAAGTCTCCACGTACCCCCTGTAGGTCTTCTGGCCATACATCCAAGACCCCTGCCCTGGCCTCTGCATCAGAAGAAACTGGGAGGAAGTTGCGGGGTAGCCCTTTGAGATCTCCAGCCAGAAGAGGTTTGGTAATGAACACTCCTCAGAAGACTGGCCTACATGTTGAAAAGCTTAAGACGCAAGTTAAGAGTTTTGTGGAGGTTATATCACCTACAAAAACACGTGCTAAGACTGGAATTTTGCAAAGTCCATCTAGAACACCAAGAAAATCACTGAGTGTCAACTGGTCACCCTCTCCACAGAAGATGACCTGTAGGGTGCTGGAGTCTCCTTGCCATTCAATACGAAGTTCCCCCAGATTATCGAAAACTCCTAAAAAATTTGGTCCTCTAGAAAATAATCCAGATGAGCCAAACACTGCAATAGCTTTGACGAAAACCCTGCAGAAGAAAAGTAGTCCCAAATCAATTGTTAAAACGCCACAGAAGCAAGGCACCCAAAGAATATCGGAGAGGCTGTTGAGGGGCATGAACACAGCTGAAAAATGTGATACAATACTCCTAATGTCCCCCAAGACTGGAGCTTCATATACCTTTGAGAGGTTCAAAGCCTGTACCCCAAAGAAAGCAATTACAATCGACCTCCTTGATGCTTCTTCCCCCCCAATACATCTCCCAAAAActccacaaaaaacatttgtaaaggGAGGTGGAATGGTTACACGTTCAGGAGGAACACCTATTAAAAATACTTCTGAATACGAAGTTGTGACCCCCATAAAGACTAAGACCACACCACGGAGAACCCCTGGGAAATCTGGAAACTCTTCTAAAGCTAGATTAGAGGCAGTAGATAAATCTCCATGTGACATGTCTGAAAGTCATTGTTCCATCTCGCCATCTCAGTGCCAGGCTGCGAGTGAGAATGGCATGGTAACTCGAGGTAGAACCAAACTGCACCAGATCTCAAGATCGAGAGAGTACTTGGAACCAACTGACCATGGTGATGAACCCAATTTGCTTAATATAAGAGCAATGAAGTCAGATAGTTTTGATATCAAGCAGAGGGACAGTGTGTTCAATTGTACACCACATCCTGAgtctttaaacatttcacaaaaagaAATGACTTCACAGTCTGATCCATTGCAGCTTGATTCTTCCCAAGCAAGTATGGCCACCTCTGGCTCTTTCGCCACCACTGAAGAAGAGAGTATTGACATCGCTGATGCCACAGTGGTGAAAACGCAGTTATCTGGAGGTGTCAAGATGAATATTTCTTATACTAGGAAGCCTCCCAGGGCCACAGATGTGTTTGAGTTTAACTCGCAACAGCCACAAGTTTCCAACTCCATTCCAGGCCCCAGTTATGGTTTCCGCTGGACCCCGGATCGCCTACAGAGGGAGGCAGCAGCTCGACTTGGGAGCCCTGAGAATATACCAAAGTTCTCGACACCTAGATCCTCGGGAACCCCCGGCCATCGACGTAGACCCTCCACCCCTGACACCCCCTCCTACCAGGTTGAGGTGGAGATGCAGGCCTCTGGATTACCCAAACTAAAGTTCAAGCGGACGGACTCCTTCAATGCTGGGGAGGCTGGTACAGAGAACAGTGTGAGGGGGATTCACCAAGACGGAGGACATAAGAGAGCTACAGGAGTGAACAGTCCACTCTCTCGCTGCACTAAGCGTAAGGAGGCAGGCTATGTCTCTCCATCCCTCTGCGCCCATGGGACTCCTGCCAAAACCACTCCAGGGAAGGGAGGCGTTCAGATGTATATATGTCAGTCCTATACACCAACCCGGCACCCTTGCACAACCCCTTCGCCATCAGGAGCTGGGGAGATAGCTCCCTGGACCCCATCCCCTCAGAGCAGAGGCAGGTGCACCCCAGAGGTCCTCAATAACTGGCCTCGGAGGAAGAGGGCAGGTGCTGAGATGGCAGGGGGGAAGGAAAAGTGCATCGTGGATGGAACCCTCACGGAAGAGGCGGAAGACTTGAAGATACTGGACGACCCTGAGCTGGAAGGTGTGTGCAGACTCCAGGACCTGCACTGCACAGAGCAGAAGGACAGTGAACTCCTGCCCAGTAGAGAAACACTGGGCTTGAGGTCCAGGAAGAGAGGTAGCAGTGAAGCCTTCACCCCTGAGAAGGAGGAGGCCCAAAGGAAGTTGAAGAAGCCTCTCCTGAGCTGCCTGGATGACTCTGATATTGCAGAAGGTGTCTTTAGTCAGTGGGAAAGTGACAGCCTTCTCAAGTTTAGTGATAAGCTACCACAGTTTACGGAGGAGGGCTCAATCTTCTCAGGAGCAACAACTCCAGGCTCTAAAGTCAGGAAACCCGTGTCTGCAAGTGGGCTTCTGGCTCTGACTCAGTCACCATTGCTGTACAAGGGAAAGAATCCATCCAGTAAACGCAGTAATGCATTAGAAGAGTCTGAGGCTGAGCCTCCCACTCAGAACAGAGCAGAGGAGCAGGAGTGGTCTCCTCTGAACGGAGCACGGCGCCACCCCTCCATGAGCCGGGCGTACAGCAGGAAGAGACTGCTGCCTTGACGTACTTTTGTGCCTCGCAGTTTGAGAATGCAAAGAAAACGACTGCTTCGATTTTTAGGAGCTCTTTATATTTATAGCAAAATTAGATGTCAGGCTCAGCTGCAGAAATGTCATTGCCTTGACCTTCAAGGAACTCGATGAAATTTAGCGTTTCTACAGAAACGATCCAGACTTCGATTTCCATGGTAAAGATTCTGGCTCCACTGACCTTGTCTTTATGAGATGTACTGTAAAGTAATTAGGCTTCATTCTTGCTTCCATTGACTCATCTGCCACAGGAATTTATAAGAATTGCAAACTTTGAATCTTGCTCCCATAACGTTAGGCTTGAACTCTTTAACCACAGTGATGAGGCAACAAACCTGGGTAGTCAAGGCTGACACCTACATCTGTGTCTTGTTGAcgcaaaatagaaaacaaacccTTAAGTTCCAGAGAAATATACTGTTtagcatttgtgtttaaaagttaaaacacacattagctccttttttgtgttttttccagctCAATATTCCTGCATTCCTGTCATGATGTGTCATTAATTCAACATGTTGCAGTGCAGTCAAAGATATTTAAAACCGTTAAGACTTCATAGGGGAGAGACAATCACATGCCTGGCCTCTGGCAGTGAGTGTGTTAAATGAACAAGATGTATGTGGCATATTGAAGTATTCATCCTAGGATACCCATGtgattttaagtgtttaaacCTATGAAGGAAATGTCATAATGGCCAGCCATCTATAATGTTGAGACAAggcagagggggggaaaaaaggaattgAATGTTATGTTTTTAGCAAATGAAGCTTAAAAGACATTCAGTTTCATGTGGAAGAACAGCCTGAACTTACATGACTTACAATAAAATAGGATCATTATGTTTATTAGAAAAACATCTGGATCATGTCTTTTATATGTTTGTCAGTTtccttttaatgtaaaaatgtgtatattttttgagggggggtggggttcaGCTGTTGTGTGCATATGTTctataatgtgaaataaatctgtaaacCGAG

Function

GO: NA

KEGG:

id description
ko04111 Cell cycle - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU31671 lncRNA downstream 87348 24498365 ~ 24542158 (-) True G25248
TU31655 lncRNA downstream 121687 24433080 ~ 24507819 (-) True G25239
TU31571 lncRNA downstream 261133 24368169 ~ 24368373 (-) True G25177
TU31570 lncRNA downstream 275196 24350030 ~ 24354310 (-) True G25176
TU31569 lncRNA downstream 282087 24347099 ~ 24347419 (-) True G25175
TU31821 lncRNA upstream 336570 24981934 ~ 24982139 (-) True G25375
TU31834 lncRNA upstream 343481 24988845 ~ 24989054 (-) True G25387
TU31874 lncRNA upstream 562410 25207774 ~ 25245930 (-) False G25415
TU31876 lncRNA upstream 562410 25207774 ~ 25247379 (-) True G25415
TU31882 lncRNA upstream 607352 25252716 ~ 25256361 (-) True G25421
AMCG00007652 mRNA downstream 5033 24614500 ~ 24624473 (-) True AMCG00007652
AMCG00007646 mRNA downstream 59209 24563795 ~ 24570297 (-) True AMCG00007646
AMCG00007642 mRNA downstream 67050 24559055 ~ 24562456 (-) True AMCG00007642
AMCG00007647 mRNA downstream 79282 24546532 ~ 24550224 (-) True AMCG00007647
AMCG00007645 mRNA downstream 134297 24484012 ~ 24495209 (-) True AMCG00007645
AMCG00007656 mRNA upstream 116554 24761918 ~ 24779617 (-) True AMCG00007656
AMCG00007662 mRNA upstream 154476 24799840 ~ 24802378 (-) True AMCG00007662
AMCG00007661 mRNA upstream 160427 24805791 ~ 24810467 (-) True AMCG00007661
AMCG00007666 mRNA upstream 288944 24934308 ~ 24945796 (-) True AMCG00007666
AMCG00007668 mRNA upstream 321508 24966872 ~ 24979337 (-) True AMCG00007668
TU31562 other downstream 361585 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 656841 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 4156802 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 4297695 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 4706353 19915146 ~ 19923153 (-) True AMCG00007487
TU31883 other upstream 618968 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 985431 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 10224071 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 12594725 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 12849547 37494911 ~ 37499392 (-) True G27416

Expression Profile