RNA id: AMCG00007653



Basic Information


Item Value
RNA id AMCG00007653
length 399
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00007653
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24694522 ~ 24704573 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aTATTTGGGGATTATTATCATTTTCAGCACCATGCCGTGGCGAAAAGATCTCTTTCTCACCATCAGTCAAGACACGTGAGGCTGCATAAGGAACCACAGGTGAAGTGGGCTGAGCAACAGGTGGTAAAAAAGCGGAAGAAGAGAGATATTTACACTGAGCCCACGGACCCCAAATTTCCCCAGCAGTGGTACCTGTTTAACGCTAATCACAGAGACCTGAATGCTAAAGGCGCCTGGGAGCAGGGCTACACTGGGAAAGGCGTTGTTGTGTCTATCCTGGATGACGGGATTGAGAAGAATCATCCTGACCTGATCCAGAATTATGACCCAGAAGCCAGCTATGACGTCAATGACAAGGACCCAGATCCCCAGCCCCGCTACACACAGCTCAACGACAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31615 lncRNA upstream 129670 24554268 ~ 24564852 (+) True G25209
TU31604 lncRNA upstream 194933 24491000 ~ 24499589 (+) False AMCG00007640
TU31603 lncRNA upstream 194933 24498934 ~ 24499589 (+) True AMCG00007640
TU31608 lncRNA upstream 203774 24484286 ~ 24490748 (+) True G25203
TU31607 lncRNA upstream 204101 24484286 ~ 24490421 (+) False G25203
TU31739 lncRNA downstream 112769 24817342 ~ 24861868 (+) False G25300
TU31738 lncRNA downstream 115526 24820099 ~ 24861868 (+) True G25300
TU31744 lncRNA downstream 174792 24879365 ~ 24911371 (+) True G25303
TU31742 lncRNA downstream 229906 24934479 ~ 24941580 (+) True G25302
TU31813 lncRNA downstream 248552 24953125 ~ 24953328 (+) True G25367
AMCG00007649 mRNA upstream 73878 24593296 ~ 24620644 (+) True AMCG00007649
AMCG00007650 mRNA upstream 108152 24579131 ~ 24586370 (+) True AMCG00007650
AMCG00007639 mRNA upstream 120492 24572886 ~ 24574030 (+) True AMCG00007639
AMCG00007641 mRNA upstream 157714 24522465 ~ 24536808 (+) True AMCG00007641
AMCG00007640 mRNA upstream 194872 24491902 ~ 24499650 (+) False AMCG00007640
AMCG00007654 mRNA downstream 12363 24716936 ~ 24738397 (+) True AMCG00007654
AMCG00007655 mRNA downstream 38361 24742934 ~ 24761289 (+) True AMCG00007655
AMCG00007660 mRNA downstream 76784 24781357 ~ 24783125 (+) True AMCG00007660
AMCG00007657 mRNA downstream 80719 24785292 ~ 24793741 (+) True AMCG00007657
AMCG00007659 mRNA downstream 90876 24795449 ~ 24799006 (+) True AMCG00007659
TU31514 other upstream 500041 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 1501001 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 2411564 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 3627739 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 5638389 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 3379249 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 3748436 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 4298522 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 5061255 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 10906543 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile