RNA id: AMCG00007660



Basic Information


Item Value
RNA id AMCG00007660
length 657
RNA type mRNA
GC content 0.57
exon number 3
gene id AMCG00007660
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24781357 ~ 24783125 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCCTCTGCCAGTCTTCTTCAATGCCAGGCTCTGCTCAGGCTCTTACTTCTGCAGAGAGGTGTTCTCTGTGGGGCTGGGATGCTCTGTGAGGGATATTGGGACCCTGCGGGGCTCCACCACTCAGGGTTTTACTGTCCCCGCCTCTCAGATCCTCCTGACCAATCCTACTGCTGCCAGCAGGGAGAACACTCCCTTAAAGACTGCTGCAACCGGTCCGACTTCCAAAGCATCATGAATATCAACCTATCAAAGCATGACAGTGCAGAACTTGTTCACAGacgtcctctctctctcgtggCCGTCCTACTGTATGGGGCTCTGGTCCTGTTCCTGATATCGGTGGATTTCCTTTGGTTTTGCCGGGTGCGAGGGCTCACTGTCACAGCAGCTCTGAGAAAGTACTTCACCTGCCCCCACTGGGCCTCCAGCCTCATCGCTCCCCGTGGCAATCAGCCCCAGCGCTACCATGGCAACAGGAATCCAGATCTACGCAGGCAAAGGACCCCGCAGAGCCCGCCTCGTCTCCACGGCAACTGGAGCCGCAGAGCGCCCAACACAGACTTCAGTAGCAACCAGAATACAGAGCTCTCTCACCTGGACCCTGAAGTGAGCAGCAGAAGGACGGAGGATGATGTGAGGTGGCCAGAGGACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31615 lncRNA upstream 216505 24554268 ~ 24564852 (+) True G25209
TU31604 lncRNA upstream 281768 24491000 ~ 24499589 (+) False AMCG00007640
TU31603 lncRNA upstream 281768 24498934 ~ 24499589 (+) True AMCG00007640
TU31608 lncRNA upstream 290609 24484286 ~ 24490748 (+) True G25203
TU31607 lncRNA upstream 290936 24484286 ~ 24490421 (+) False G25203
TU31739 lncRNA downstream 34217 24817342 ~ 24861868 (+) False G25300
TU31738 lncRNA downstream 36974 24820099 ~ 24861868 (+) True G25300
TU31744 lncRNA downstream 96240 24879365 ~ 24911371 (+) True G25303
TU31742 lncRNA downstream 151354 24934479 ~ 24941580 (+) True G25302
TU31813 lncRNA downstream 170000 24953125 ~ 24953328 (+) True G25367
AMCG00007655 mRNA upstream 20068 24742934 ~ 24761289 (+) True AMCG00007655
AMCG00007654 mRNA upstream 42960 24716936 ~ 24738397 (+) True AMCG00007654
AMCG00007653 mRNA upstream 76784 24694522 ~ 24704573 (+) True AMCG00007653
AMCG00007649 mRNA upstream 160713 24593296 ~ 24620644 (+) True AMCG00007649
AMCG00007650 mRNA upstream 194987 24579131 ~ 24586370 (+) True AMCG00007650
AMCG00007657 mRNA downstream 2167 24785292 ~ 24793741 (+) True AMCG00007657
AMCG00007659 mRNA downstream 12324 24795449 ~ 24799006 (+) True AMCG00007659
AMCG00007658 mRNA downstream 21383 24804508 ~ 24805488 (+) True AMCG00007658
AMCG00007665 mRNA downstream 199548 24982673 ~ 24984023 (+) True AMCG00007665
AMCG00007664 mRNA downstream 201872 24984997 ~ 24988135 (+) True AMCG00007664
TU31514 other upstream 586876 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 1587836 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 2498399 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 3714574 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 5725224 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 3300697 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 3669884 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 4219970 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 4982703 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 10827991 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile