RNA id: AMCG00007665



Basic Information


Item Value
RNA id AMCG00007665
length 343
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00007665
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24982673 ~ 24984023 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCGGCCCTGTGCTGTATCGCTGACGGCAGCAGCTCGCCGGCGGAGACGTGCTGGTCCCTCAGGCCGGCCATTGCGGCTCTGCTGCGCTGCGATCATGGCGACCAGGTGGGGGATCTGTGGGGCCGGACGGATCAGCAACGACTTCACCGTGGCTCTGAAAACGCTGCCCCCAGAGGACCACCAGGTTGTGGCAGTGGCATCCAGAGACCTTCAGCGTGCCAAGGAGTTCTCCCAGAGGCATGGCATCGAGAGAGCCTACGGGAGCTATGAGGAACTGGCCAATGACCATGATATTGGTAAAGACCTGCTAGTGTTTGTGAATGGCCAATACTGCCCCGTGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31813 lncRNA upstream 29345 24953125 ~ 24953328 (+) True G25367
TU31742 lncRNA upstream 41093 24934479 ~ 24941580 (+) True G25302
TU31744 lncRNA upstream 71302 24879365 ~ 24911371 (+) True G25303
TU31739 lncRNA upstream 120805 24817342 ~ 24861868 (+) False G25300
TU31738 lncRNA upstream 120805 24820099 ~ 24861868 (+) True G25300
TU31861 lncRNA downstream 331764 25315787 ~ 25321025 (+) True G25405
TU31915 lncRNA downstream 467510 25451533 ~ 25451793 (+) True G25445
TU32014 lncRNA downstream 1069678 26053701 ~ 26061246 (+) True G25531
TU32051 lncRNA downstream 1150338 26134361 ~ 26134577 (+) True G25561
TU32052 lncRNA downstream 1152744 26136767 ~ 26142288 (+) True G25562
AMCG00007658 mRNA upstream 177185 24804508 ~ 24805488 (+) True AMCG00007658
AMCG00007659 mRNA upstream 183667 24795449 ~ 24799006 (+) True AMCG00007659
AMCG00007657 mRNA upstream 188932 24785292 ~ 24793741 (+) True AMCG00007657
AMCG00007660 mRNA upstream 199548 24781357 ~ 24783125 (+) True AMCG00007660
AMCG00007655 mRNA upstream 221384 24742934 ~ 24761289 (+) True AMCG00007655
AMCG00007664 mRNA downstream 974 24984997 ~ 24988135 (+) True AMCG00007664
AMCG00007663 mRNA downstream 31653 25015676 ~ 25035688 (+) True AMCG00007663
AMCG00007670 mRNA downstream 84038 25068061 ~ 25076698 (+) True AMCG00007670
AMCG00007669 mRNA downstream 156907 25140930 ~ 25170375 (+) True AMCG00007669
AMCG00007673 mRNA downstream 248867 25232890 ~ 25233495 (+) True AMCG00007673
TU31514 other upstream 788192 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 1789152 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 2699715 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 3915890 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 5926540 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 3099799 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 3468986 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 4019072 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 4781805 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 10627093 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile