RNA id: AMCG00007673



Basic Information


Item Value
RNA id AMCG00007673
length 606
RNA type mRNA
GC content 0.56
exon number 1
gene id AMCG00007673
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25232890 ~ 25233495 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCACCTGGGGGAATAGGCAAACTAGCACCAGGGAACTTTAAGAAAGTGTGCAAGACAGAGGAGCAGAGCCCCTCACCGTTCCCAGGACTTCCCCCTGATGTGGTGGAGATGCGGGTGAAGGAGGGCAGCAAAATCCGCAACTTGATGGGTTTTGCCATGACGCGGATGGAGAGTGGAGGGTCACGGCAGATCATGTTCAGTGGCTCAGGCCGCGCCGTCACGAAGACCATCACCTGCGTGGAGATCATGAAGCGCAAGATGGGTGGGCTCCACCAGATCACAAAGCTGAGGTACAAAGGCCTTCAGGAGGTGTGGGAGAGCCAAGAGGAAGGGCCTGGTCAGGCCTCAGAGATGACCGTCCACAGAAATGTGCCCTCTGTCTGCATCTTGCTCTCCAAAGACCCCCTGGACCCCCAGGAACATGGATACCAGCCCCCAGAGTCTCTAAGCACCCTCTGGGAAACCAAACAGGAGGAGATCAGAACTGAAAGCCCCTCCCCACAATGCGGCAAGCGTCCGCTCAGCTTTCTAGCAGATGTCAATGAGCCGGAAAGCAAGAGACTCAGTTTGGAGGGAGACCCTTCGAGGTACATGACTGACTGA

Function


GO: NA

KEGG:

id description
K14525 RPP25; ribonucleases P/MRP protein subunit RPP25

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31813 lncRNA upstream 279562 24953125 ~ 24953328 (+) True G25367
TU31742 lncRNA upstream 291310 24934479 ~ 24941580 (+) True G25302
TU31744 lncRNA upstream 321519 24879365 ~ 24911371 (+) True G25303
TU31739 lncRNA upstream 371022 24817342 ~ 24861868 (+) False G25300
TU31861 lncRNA downstream 82292 25315787 ~ 25321025 (+) True G25405
TU31915 lncRNA downstream 218038 25451533 ~ 25451793 (+) True G25445
TU32014 lncRNA downstream 820206 26053701 ~ 26061246 (+) True G25531
TU32051 lncRNA downstream 900866 26134361 ~ 26134577 (+) True G25561
TU32052 lncRNA downstream 903272 26136767 ~ 26142288 (+) True G25562
AMCG00007669 mRNA upstream 62515 25140930 ~ 25170375 (+) True AMCG00007669
AMCG00007670 mRNA upstream 156192 25068061 ~ 25076698 (+) True AMCG00007670
AMCG00007663 mRNA upstream 197202 25015676 ~ 25035688 (+) True AMCG00007663
AMCG00007664 mRNA upstream 244755 24984997 ~ 24988135 (+) True AMCG00007664
AMCG00007665 mRNA upstream 248867 24982673 ~ 24984023 (+) True AMCG00007665
AMCG00007672 mRNA downstream 8459 25241954 ~ 25247349 (+) True AMCG00007672
AMCG00007671 mRNA downstream 14306 25247801 ~ 25256361 (+) True AMCG00007671
AMCG00007674 mRNA downstream 70784 25304279 ~ 25314909 (+) True AMCG00007674
AMCG00007680 mRNA downstream 221185 25454680 ~ 25467236 (+) True AMCG00007680
AMCG00007681 mRNA downstream 301014 25534509 ~ 25534985 (+) True AMCG00007681
TU31514 other upstream 1038409 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 2039369 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 2949932 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 4166107 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 6176757 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 2850327 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 3219514 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 3769600 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 4532333 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 10377621 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile