RNA id: AMCG00007724


Basic Information

Item Value
RNA id AMCG00007724
length 567
RNA type mRNA
GC content 0.61
exon number 4
gene id AMCG00007724
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27879260 ~ 27884397 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTCAAAGTCATAAGACACCGCATTAGCAAAGATGCCTGCTGGCTTGAAATGTGCCACTTGTTAAAAGACAAGCAGGCACTAACTCTTAACAATTCTATATTCCTCCAGCTACAGAAGAGCTCCTTCAGCGCTAAAGCAGAAATCTACCCTTTAAAAACGCGCTGTGAGGTGCAAAGCGACGCATCCTGGCAGTCAGTAAACCCCATTGACAGACAATTATCAACCGCCTCTTACCTCCAGCCCTGCGAGAGTCCCAGCCTGCGCGCCCTCGCCAGCGAAGCGCTCTGTCCCGGACGCCGGCGGCGCGCAGCGGGCTGCCTCCCCCACAAGACGAGCCGCAATCCCCGCGACGGCGCTCACAAGCGGCCGCACATCCAGCTCCGCGTCGGCCGGCCGCTGTCCACTAAATCCAGAGTCCTGCAGCCTCTGATGCTCGGGCACGACGCGCGCTCCCGCCCTGCCTGCTCCTGTGGGGGGGGGCGGCGCGAGGGCGGGGCAGCAGAGGGAGTGCCTGAAAACGTCCTTCTGCGTGGGAACCCCGGTTGCCCCGCAGGACTGTCGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32318 lncRNA downstream 212188 27662224 ~ 27667072 (-) False G25768
TU32317 lncRNA downstream 212710 27662224 ~ 27666550 (-) True G25768
TU32286 lncRNA downstream 314551 27564039 ~ 27564709 (-) True G25750
TU32285 lncRNA downstream 315570 27563240 ~ 27563690 (-) True G25749
TU32284 lncRNA downstream 316242 27562728 ~ 27563018 (-) True G25748
TU32591 lncRNA upstream 792443 28676840 ~ 28702537 (-) True G25968
TU32595 lncRNA upstream 812068 28696465 ~ 28699849 (-) True G25972
TU32612 lncRNA upstream 848367 28732764 ~ 28732994 (-) True G25985
TU32614 lncRNA upstream 849715 28734112 ~ 28734449 (-) True G25987
TU32688 lncRNA upstream 1010296 28894693 ~ 28898576 (-) True AMCG00007757
AMCG00007722 mRNA downstream 125 27873263 ~ 27879135 (-) True AMCG00007722
AMCG00007719 mRNA downstream 206515 27667521 ~ 27672745 (-) True AMCG00007719
AMCG00007712 mRNA downstream 309719 27566167 ~ 27569541 (-) True AMCG00007712
AMCG00007713 mRNA downstream 346539 27518538 ~ 27532721 (-) True AMCG00007713
AMCG00007704 mRNA downstream 508878 27357735 ~ 27370382 (-) True AMCG00007704
AMCG00007726 mRNA upstream 173038 28057435 ~ 28063864 (-) True AMCG00007726
AMCG00007730 mRNA upstream 200289 28084686 ~ 28099269 (-) True AMCG00007730
AMCG00007728 mRNA upstream 220071 28104468 ~ 28128157 (-) True AMCG00007728
AMCG00007729 mRNA upstream 249141 28133538 ~ 28182525 (-) True AMCG00007729
AMCG00007731 mRNA upstream 299154 28183551 ~ 28194125 (-) True AMCG00007731
TU31949 other downstream 2247668 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 2614309 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 3611339 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 3906595 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 7406556 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 6985038 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 9355692 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 9610514 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 9683220 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 9686560 37570957 ~ 37571488 (-) True G27439

Expression Profile