Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007726 |
| length | 1287 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 8 |
| gene id | AMCG00007726 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 28057435 ~ 28063864 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0003707 | steroid hormone receptor activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K08546 | NR2E3, PNR; nuclear receptor subfamily 2 group E member 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32318 | lncRNA | downstream | 390363 | 27662224 ~ 27667072 (-) | False | G25768 |
| TU32317 | lncRNA | downstream | 390885 | 27662224 ~ 27666550 (-) | True | G25768 |
| TU32286 | lncRNA | downstream | 492726 | 27564039 ~ 27564709 (-) | True | G25750 |
| TU32285 | lncRNA | downstream | 493745 | 27563240 ~ 27563690 (-) | True | G25749 |
| TU32284 | lncRNA | downstream | 494417 | 27562728 ~ 27563018 (-) | True | G25748 |
| TU32591 | lncRNA | upstream | 612976 | 28676840 ~ 28702537 (-) | True | G25968 |
| TU32595 | lncRNA | upstream | 632601 | 28696465 ~ 28699849 (-) | True | G25972 |
| TU32612 | lncRNA | upstream | 668900 | 28732764 ~ 28732994 (-) | True | G25985 |
| TU32614 | lncRNA | upstream | 670248 | 28734112 ~ 28734449 (-) | True | G25987 |
| TU32688 | lncRNA | upstream | 830829 | 28894693 ~ 28898576 (-) | True | AMCG00007757 |
| AMCG00007724 | mRNA | downstream | 173038 | 27879260 ~ 27884397 (-) | True | AMCG00007724 |
| AMCG00007722 | mRNA | downstream | 178300 | 27873263 ~ 27879135 (-) | True | AMCG00007722 |
| AMCG00007719 | mRNA | downstream | 384690 | 27667521 ~ 27672745 (-) | True | AMCG00007719 |
| AMCG00007712 | mRNA | downstream | 487894 | 27566167 ~ 27569541 (-) | True | AMCG00007712 |
| AMCG00007713 | mRNA | downstream | 524714 | 27518538 ~ 27532721 (-) | True | AMCG00007713 |
| AMCG00007730 | mRNA | upstream | 20822 | 28084686 ~ 28099269 (-) | True | AMCG00007730 |
| AMCG00007728 | mRNA | upstream | 40604 | 28104468 ~ 28128157 (-) | True | AMCG00007728 |
| AMCG00007729 | mRNA | upstream | 69674 | 28133538 ~ 28182525 (-) | True | AMCG00007729 |
| AMCG00007731 | mRNA | upstream | 119687 | 28183551 ~ 28194125 (-) | True | AMCG00007731 |
| AMCG00007732 | mRNA | upstream | 178453 | 28242317 ~ 28266497 (-) | True | AMCG00007732 |
| TU31949 | other | downstream | 2425843 | 25630795 ~ 25631592 (-) | True | AMCG00007684 |
| TU31883 | other | downstream | 2792484 | 25264332 ~ 25264951 (-) | True | G25422 |
| TU31562 | other | downstream | 3789514 | 24265824 ~ 24267921 (-) | False | AMCG00007637 |
| TU31390 | other | downstream | 4084770 | 23971671 ~ 23972665 (-) | True | G25026 |
| TU30382 | other | downstream | 7584731 | 20471111 ~ 20472704 (-) | True | AMCG00007500 |
| TU33771 | other | upstream | 6805571 | 34869435 ~ 34869807 (-) | True | G26961 |
| TU34246 | other | upstream | 9176225 | 37240089 ~ 37242983 (-) | False | AMCG00007929 |
| TU34303 | other | upstream | 9431047 | 37494911 ~ 37499392 (-) | True | G27416 |
| TU34324 | other | upstream | 9503753 | 37567617 ~ 37569284 (-) | True | G27437 |
| TU34326 | other | upstream | 9507093 | 37570957 ~ 37571488 (-) | True | G27439 |
