Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007735 |
| length | 1394 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | AMCG00007735 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 28438644 ~ 28454707 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008203 | cholesterol metabolic process | biological_process |
| GO:0008207 | C21-steroid hormone metabolic process | biological_process |
| GO:0006694 | steroid biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0031966 | mitochondrial membrane | cellular_component |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| GO:0008386 | cholesterol monooxygenase (side-chain-cleaving) activity | molecular_function |
| id | description |
|---|---|
| K00498 | CYP11A; cholesterol monooxygenase (side-chain-cleaving) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32410 | lncRNA | upstream | 329054 | 28104602 ~ 28109590 (+) | True | G25827 |
| TU32393 | lncRNA | upstream | 360523 | 28070346 ~ 28078121 (+) | True | G25819 |
| TU32289 | lncRNA | upstream | 867153 | 27570543 ~ 27571491 (+) | True | G25753 |
| TU32235 | lncRNA | upstream | 869291 | 27566695 ~ 27569353 (+) | True | G25709 |
| TU32559 | lncRNA | downstream | 228138 | 28682171 ~ 28699741 (+) | True | AMCG00007754 |
| TU32560 | lncRNA | downstream | 228138 | 28682171 ~ 28699741 (+) | False | AMCG00007754 |
| TU32611 | lncRNA | downstream | 277097 | 28731130 ~ 28731401 (+) | True | G25984 |
| TU32676 | lncRNA | downstream | 446025 | 28900058 ~ 28901126 (+) | False | AMCG00007763 |
| TU32753 | lncRNA | downstream | 620423 | 29074456 ~ 29082381 (+) | True | G26103 |
| AMCG00007734 | mRNA | upstream | 609 | 28431981 ~ 28438035 (+) | True | AMCG00007734 |
| AMCG00007736 | mRNA | upstream | 17348 | 28414965 ~ 28421296 (+) | True | AMCG00007736 |
| AMCG00007733 | mRNA | upstream | 60392 | 28367268 ~ 28378252 (+) | True | AMCG00007733 |
| AMCG00007725 | mRNA | upstream | 382787 | 27965346 ~ 28055857 (+) | True | AMCG00007725 |
| AMCG00007727 | mRNA | upstream | 517004 | 27918958 ~ 27921640 (+) | True | AMCG00007727 |
| AMCG00007741 | mRNA | downstream | 97787 | 28551820 ~ 28576250 (+) | True | AMCG00007741 |
| AMCG00007746 | mRNA | downstream | 158581 | 28612614 ~ 28617398 (+) | True | AMCG00007746 |
| AMCG00007747 | mRNA | downstream | 165388 | 28619421 ~ 28623990 (+) | True | AMCG00007747 |
| AMCG00007745 | mRNA | downstream | 183863 | 28637896 ~ 28646093 (+) | True | AMCG00007745 |
| AMCG00007754 | mRNA | downstream | 228151 | 28682184 ~ 28700062 (+) | False | AMCG00007754 |
| TU32400 | other | upstream | 343903 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU31514 | other | upstream | 4244163 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU31151 | other | upstream | 5245123 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU30868 | other | upstream | 6155686 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU30494 | other | upstream | 7371861 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU32711 | other | downstream | 549062 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32939 | other | downstream | 1311795 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU33841 | other | downstream | 7157083 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU34416 | other | downstream | 9690951 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 9714537 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
