RNA id: AMCG00007769


Basic Information

Item Value
RNA id AMCG00007769
length 195
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00007769
representative False

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29003095 ~ 29006379 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCTACCTGAACATGGAGGACAGGACCGCAGAGTCTCTGGACGAGTATGGGTGGCTGTGCTCAGGGGATTTAGGGAAGACTGACAACGATGGATTTCTTTACATCACAGGACGGATCAAAGGCCTCGTACAGCAGAATGTTGAGTCCCAGAAAGAACTCCAGAGTCTCGCTGGTGATGGGAGCTGCCCCTGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32676 lncRNA upstream 102158 28900058 ~ 28901126 (+) False AMCG00007763
TU32611 lncRNA upstream 271883 28731130 ~ 28731401 (+) True G25984
TU32559 lncRNA upstream 303543 28682171 ~ 28699741 (+) True AMCG00007754
TU32560 lncRNA upstream 303543 28682171 ~ 28699741 (+) False AMCG00007754
TU32410 lncRNA upstream 893694 28104602 ~ 28109590 (+) True G25827
TU32753 lncRNA downstream 68077 29074456 ~ 29082381 (+) True G26103
TU32804 lncRNA downstream 305244 29311623 ~ 29311944 (+) True G26146
TU32833 lncRNA downstream 360994 29367373 ~ 29367723 (+) True G26167
TU32837 lncRNA downstream 367997 29374376 ~ 29375878 (+) True G26171
TU32864 lncRNA downstream 533304 29539683 ~ 29540062 (+) True G26196
AMCG00007767 mRNA upstream 3199 28989713 ~ 29000085 (+) True AMCG00007767
AMCG00007755 mRNA upstream 14371 28980823 ~ 28988913 (+) True AMCG00007755
AMCG00007756 mRNA upstream 66450 28932965 ~ 28936834 (+) True AMCG00007756
AMCG00007763 mRNA upstream 91718 28900259 ~ 28911566 (+) True AMCG00007763
AMCG00007752 mRNA upstream 226920 28766715 ~ 28776364 (+) True AMCG00007752
AMCG00007765 mRNA downstream 18406 29024785 ~ 29032207 (+) True AMCG00007765
AMCG00007764 mRNA downstream 26375 29032754 ~ 29055451 (+) True AMCG00007764
AMCG00007766 mRNA downstream 52652 29059031 ~ 29071456 (+) True AMCG00007766
AMCG00007774 mRNA downstream 252051 29258430 ~ 29288693 (+) True AMCG00007774
AMCG00007775 mRNA downstream 314852 29321231 ~ 29336890 (+) True AMCG00007775
TU32501 other upstream 548577 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 908543 28083822 ~ 28094741 (+) True G25822
TU31514 other upstream 4808803 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 5809763 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 6720326 22281700 ~ 22282958 (+) True G24606
TU32939 other downstream 759449 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 6604737 35611116 ~ 35620801 (+) False AMCG00007873
TU34416 other downstream 9138605 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 9162191 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 9349550 38355929 ~ 38412929 (+) False AMCG00007957