Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007773 |
| length | 1005 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 6 |
| gene id | AMCG00007773 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 29339646 ~ 29342580 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006465 | signal peptide processing | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| K13280 | SEC11, sipW; signal peptidase I |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32804 | lncRNA | upstream | 27702 | 29311623 ~ 29311944 (+) | True | G26146 |
| TU32753 | lncRNA | upstream | 257265 | 29074456 ~ 29082381 (+) | True | G26103 |
| TU32676 | lncRNA | upstream | 438520 | 28900058 ~ 28901126 (+) | False | AMCG00007763 |
| TU32611 | lncRNA | upstream | 608245 | 28731130 ~ 28731401 (+) | True | G25984 |
| TU32560 | lncRNA | upstream | 639905 | 28682171 ~ 28699741 (+) | False | AMCG00007754 |
| TU32833 | lncRNA | downstream | 24793 | 29367373 ~ 29367723 (+) | True | G26167 |
| TU32837 | lncRNA | downstream | 31796 | 29374376 ~ 29375878 (+) | True | G26171 |
| TU32864 | lncRNA | downstream | 197103 | 29539683 ~ 29540062 (+) | True | G26196 |
| TU32910 | lncRNA | downstream | 369919 | 29712499 ~ 29724420 (+) | True | AMCG00007788 |
| TU32916 | lncRNA | downstream | 383814 | 29726394 ~ 29729537 (+) | True | G26243 |
| AMCG00007775 | mRNA | upstream | 2756 | 29321231 ~ 29336890 (+) | True | AMCG00007775 |
| AMCG00007774 | mRNA | upstream | 50953 | 29258430 ~ 29288693 (+) | True | AMCG00007774 |
| AMCG00007766 | mRNA | upstream | 268190 | 29059031 ~ 29071456 (+) | True | AMCG00007766 |
| AMCG00007764 | mRNA | upstream | 284195 | 29032754 ~ 29055451 (+) | True | AMCG00007764 |
| AMCG00007765 | mRNA | upstream | 307439 | 29024785 ~ 29032207 (+) | True | AMCG00007765 |
| AMCG00007776 | mRNA | downstream | 8490 | 29351070 ~ 29351882 (+) | True | AMCG00007776 |
| AMCG00007777 | mRNA | downstream | 12471 | 29355051 ~ 29361487 (+) | True | AMCG00007777 |
| AMCG00007781 | mRNA | downstream | 50327 | 29392907 ~ 29402001 (+) | True | AMCG00007781 |
| AMCG00007785 | mRNA | downstream | 90432 | 29433012 ~ 29437033 (+) | True | AMCG00007785 |
| AMCG00007784 | mRNA | downstream | 95086 | 29437666 ~ 29485183 (+) | True | AMCG00007784 |
| TU32711 | other | upstream | 335873 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32501 | other | upstream | 884939 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32400 | other | upstream | 1244905 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU31514 | other | upstream | 5145165 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU31151 | other | upstream | 6146125 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU32939 | other | downstream | 423248 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU33841 | other | downstream | 6268536 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU34416 | other | downstream | 8802404 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 8825990 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
| TU34447 | other | downstream | 9013349 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
