RNA id: AMCG00007785



Basic Information


Item Value
RNA id AMCG00007785
length 246
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00007785
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29433012 ~ 29437033 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCTAAAGACTGCCGCAATGATGGCAGACGGCGTGGAGCTGGGCAGCACCGGCTCGGCCCTGCGCTGGACGGCAGGGAGAGAGCGGGGAAGAGGATGGGCCCTGGCGTGGACGGGAGGGAGAGGTCTGGGAGCAACAGCTCGGGGTCGTCGCACGGAGGAGGCAAAGGGAAGAATACCCCAATCAGCATCGCACTGAAGAGCTGGGTCCAGGGGAACTGCCTAACGCTGAAAGCTGAATTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32837 lncRNA upstream 57134 29374376 ~ 29375878 (+) True G26171
TU32833 lncRNA upstream 65289 29367373 ~ 29367723 (+) True G26167
TU32804 lncRNA upstream 121068 29311623 ~ 29311944 (+) True G26146
TU32753 lncRNA upstream 350631 29074456 ~ 29082381 (+) True G26103
TU32676 lncRNA upstream 531886 28900058 ~ 28901126 (+) False AMCG00007763
TU32864 lncRNA downstream 102650 29539683 ~ 29540062 (+) True G26196
TU32910 lncRNA downstream 275466 29712499 ~ 29724420 (+) True AMCG00007788
TU32916 lncRNA downstream 289361 29726394 ~ 29729537 (+) True G26243
TU32926 lncRNA downstream 301669 29738702 ~ 29741082 (+) True G26249
TU32937 lncRNA downstream 318007 29755040 ~ 29819552 (+) False G26258
AMCG00007781 mRNA upstream 31011 29392907 ~ 29402001 (+) True AMCG00007781
AMCG00007777 mRNA upstream 71525 29355051 ~ 29361487 (+) True AMCG00007777
AMCG00007776 mRNA upstream 81130 29351070 ~ 29351882 (+) True AMCG00007776
AMCG00007773 mRNA upstream 90432 29339646 ~ 29342580 (+) True AMCG00007773
AMCG00007775 mRNA upstream 96122 29321231 ~ 29336890 (+) True AMCG00007775
AMCG00007784 mRNA downstream 633 29437666 ~ 29485183 (+) True AMCG00007784
AMCG00007787 mRNA downstream 149440 29586473 ~ 29608597 (+) True AMCG00007787
AMCG00007788 mRNA downstream 185278 29622311 ~ 29724734 (+) False AMCG00007788
AMCG00007796 mRNA downstream 492715 29929748 ~ 29941831 (+) True AMCG00007796
AMCG00007797 mRNA downstream 508087 29945120 ~ 30043181 (+) True AMCG00007797
TU32711 other upstream 429239 29003095 ~ 29003773 (+) True AMCG00007769
TU32501 other upstream 978305 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 1338271 28083822 ~ 28094741 (+) True G25822
TU31514 other upstream 5238531 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 6239491 23189460 ~ 23193521 (+) True G24824
TU32939 other downstream 328795 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 6174083 35611116 ~ 35620801 (+) False AMCG00007873
TU34416 other downstream 8707951 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 8731537 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 8918896 38355929 ~ 38412929 (+) False AMCG00007957

Expression Profile