Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007806 |
| length | 1336 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 3 |
| gene id | AMCG00007806 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 30610218 ~ 30613192 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0006367 | transcription initiation from RNA polymerase II promoter | biological_process |
| GO:0006413 | translational initiation | biological_process |
| GO:0005672 | transcription factor TFIIA complex | cellular_component |
| GO:0003743 | translation initiation factor activity | molecular_function |
| id | description |
|---|---|
| K03123 | TFIIA2, GTF2A2, TOA2; transcription initiation factor TFIIA small subunit |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33060 | lncRNA | upstream | 87708 | 30510535 ~ 30522510 (+) | True | G26360 |
| TU33009 | lncRNA | upstream | 203571 | 30402565 ~ 30406647 (+) | True | G26319 |
| TU32945 | lncRNA | upstream | 806615 | 29799757 ~ 29803603 (+) | True | G26262 |
| TU32935 | lncRNA | upstream | 835183 | 29768193 ~ 29775035 (+) | False | G26258 |
| TU33144 | lncRNA | downstream | 331109 | 30944301 ~ 30945248 (+) | True | G26430 |
| TU33143 | lncRNA | downstream | 332111 | 30945303 ~ 30946095 (+) | True | G26429 |
| TU33147 | lncRNA | downstream | 342446 | 30955638 ~ 30955893 (+) | True | G26433 |
| TU33175 | lncRNA | downstream | 487079 | 31100271 ~ 31100516 (+) | True | G26458 |
| TU33178 | lncRNA | downstream | 490762 | 31103954 ~ 31106021 (+) | True | G26461 |
| AMCG00007802 | mRNA | upstream | 2195 | 30590214 ~ 30608023 (+) | True | AMCG00007802 |
| AMCG00007800 | mRNA | upstream | 172085 | 30429840 ~ 30438133 (+) | True | AMCG00007800 |
| AMCG00007799 | mRNA | upstream | 181088 | 30409031 ~ 30429130 (+) | True | AMCG00007799 |
| AMCG00007798 | mRNA | upstream | 209115 | 30388193 ~ 30401103 (+) | True | AMCG00007798 |
| AMCG00007797 | mRNA | upstream | 567037 | 29945120 ~ 30043181 (+) | True | AMCG00007797 |
| AMCG00007805 | mRNA | downstream | 118419 | 30731611 ~ 30774461 (+) | True | AMCG00007805 |
| AMCG00007809 | mRNA | downstream | 269724 | 30882916 ~ 30915465 (+) | True | AMCG00007809 |
| AMCG00007808 | mRNA | downstream | 328007 | 30941199 ~ 30943727 (+) | True | AMCG00007808 |
| AMCG00007816 | mRNA | downstream | 483546 | 31096738 ~ 31098357 (+) | True | AMCG00007816 |
| AMCG00007813 | mRNA | downstream | 498453 | 31111645 ~ 31136247 (+) | True | AMCG00007813 |
| TU32939 | other | upstream | 835183 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU32711 | other | upstream | 1606445 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32501 | other | upstream | 2155511 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32400 | other | upstream | 2515477 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU31514 | other | upstream | 6415737 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU33841 | other | downstream | 4997924 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU34416 | other | downstream | 7531792 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 7555378 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
| TU34447 | other | downstream | 7742737 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
| TU34460 | other | downstream | 7818853 | 38432045 ~ 38436595 (+) | True | G27551 |
