Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007828 |
| length | 1189 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | AMCG00007828 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 31654997 ~ 31662592 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K00078 | DHDH; dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33260 | lncRNA | upstream | 230306 | 31414154 ~ 31424691 (+) | False | AMCG00007827 |
| TU33208 | lncRNA | upstream | 436675 | 31218110 ~ 31218322 (+) | True | G26483 |
| TU33180 | lncRNA | upstream | 547748 | 31106714 ~ 31107249 (+) | True | G26463 |
| TU33179 | lncRNA | upstream | 548373 | 31106414 ~ 31106624 (+) | True | G26462 |
| TU33178 | lncRNA | upstream | 548976 | 31103954 ~ 31106021 (+) | True | G26461 |
| TU33371 | lncRNA | downstream | 119046 | 31781638 ~ 31781891 (+) | True | G26625 |
| TU33398 | lncRNA | downstream | 160148 | 31822740 ~ 31822973 (+) | True | G26645 |
| TU33452 | lncRNA | downstream | 959668 | 32622260 ~ 32622530 (+) | True | G26698 |
| TU33459 | lncRNA | downstream | 1225198 | 32887790 ~ 32888040 (+) | True | G26704 |
| TU33593 | lncRNA | downstream | 2127348 | 33789940 ~ 33794941 (+) | False | AMCG00007854 |
| AMCG00007830 | mRNA | upstream | 36119 | 31580726 ~ 31618878 (+) | True | AMCG00007830 |
| AMCG00007832 | mRNA | upstream | 95542 | 31556435 ~ 31559455 (+) | True | AMCG00007832 |
| AMCG00007833 | mRNA | upstream | 118988 | 31535329 ~ 31536009 (+) | True | AMCG00007833 |
| AMCG00007826 | mRNA | upstream | 145048 | 31508671 ~ 31509949 (+) | True | AMCG00007826 |
| AMCG00007825 | mRNA | upstream | 157186 | 31495939 ~ 31497811 (+) | True | AMCG00007825 |
| AMCG00007829 | mRNA | downstream | 2054 | 31664646 ~ 31683335 (+) | True | AMCG00007829 |
| AMCG00007834 | mRNA | downstream | 132381 | 31794973 ~ 31800664 (+) | True | AMCG00007834 |
| AMCG00007838 | mRNA | downstream | 153651 | 31816243 ~ 31818992 (+) | True | AMCG00007838 |
| AMCG00007840 | mRNA | downstream | 542414 | 32205006 ~ 32219672 (+) | True | AMCG00007840 |
| AMCG00007839 | mRNA | downstream | 663030 | 32325622 ~ 32356646 (+) | True | AMCG00007839 |
| TU32939 | other | upstream | 1879962 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU32711 | other | upstream | 2651224 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32501 | other | upstream | 3200290 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32400 | other | upstream | 3560256 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU31514 | other | upstream | 7460516 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU33841 | other | downstream | 3948524 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU34416 | other | downstream | 6482392 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 6505978 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
| TU34447 | other | downstream | 6693337 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
| TU34460 | other | downstream | 6769453 | 38432045 ~ 38436595 (+) | True | G27551 |
