RNA id: AMCG00007832



Basic Information


Item Value
RNA id AMCG00007832
length 507
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00007832
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31556435 ~ 31559455 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGTGTAACATGTCCCCCTTTCTGTAGGTTCTACTGGGATCTGACCATGCTGCTTCTGATGGTGGGCAACTTGATCATTATCCCCGTGGGCATCACCTTCTTCAAGGATGAGCACACGCCCCCCTGGATCGTGTTCAACGTTGTGTCGGACACCTTCTTCCTCATTGACCTGGTGCTCAACTTCCGCACGGGCATCGTCAAGGAGGACAACACCGAGATCATCCTGGACCCGCAGCGCATCAAGATGAAGTACCTGCGCAGCTGGTTCGTGGTGGACTTCATCTCTTCCATCCCTGTGGACTATATCTTCCTCATCGTAGAGACCCGCATCGACTCGGACTTCTACAAGACAGCCCGGGCTCTGCGTATCGTCCGCTTCACCAAGATCCTCAGTCTGCTCAGGCTACTGCGGCTCTCACGCCTCATCCGCTACATCCACCAGTGGGAGGAGAGCACTGCCAACCTCGAATCAAGTGCGGTCTGGTTTTCACAACTCAGAGGCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU33260 lncRNA upstream 131744 31414154 ~ 31424691 (+) False AMCG00007827
TU33208 lncRNA upstream 338113 31218110 ~ 31218322 (+) True G26483
TU33180 lncRNA upstream 449186 31106714 ~ 31107249 (+) True G26463
TU33179 lncRNA upstream 449811 31106414 ~ 31106624 (+) True G26462
TU33178 lncRNA upstream 450414 31103954 ~ 31106021 (+) True G26461
TU33371 lncRNA downstream 222183 31781638 ~ 31781891 (+) True G26625
TU33398 lncRNA downstream 263285 31822740 ~ 31822973 (+) True G26645
TU33452 lncRNA downstream 1062805 32622260 ~ 32622530 (+) True G26698
TU33459 lncRNA downstream 1328335 32887790 ~ 32888040 (+) True G26704
TU33593 lncRNA downstream 2230485 33789940 ~ 33794941 (+) False AMCG00007854
AMCG00007833 mRNA upstream 20426 31535329 ~ 31536009 (+) True AMCG00007833
AMCG00007826 mRNA upstream 46486 31508671 ~ 31509949 (+) True AMCG00007826
AMCG00007825 mRNA upstream 58624 31495939 ~ 31497811 (+) True AMCG00007825
AMCG00007827 mRNA upstream 116057 31421210 ~ 31440378 (+) True AMCG00007827
AMCG00007819 mRNA upstream 217252 31325082 ~ 31339183 (+) True AMCG00007819
AMCG00007830 mRNA downstream 21271 31580726 ~ 31618878 (+) True AMCG00007830
AMCG00007828 mRNA downstream 95542 31654997 ~ 31662592 (+) True AMCG00007828
AMCG00007829 mRNA downstream 105191 31664646 ~ 31683335 (+) True AMCG00007829
AMCG00007834 mRNA downstream 235518 31794973 ~ 31800664 (+) True AMCG00007834
AMCG00007838 mRNA downstream 256788 31816243 ~ 31818992 (+) True AMCG00007838
TU32939 other upstream 1781400 29765828 ~ 29775035 (+) False G26258
TU32711 other upstream 2552662 29003095 ~ 29003773 (+) True AMCG00007769
TU32501 other upstream 3101728 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 3461694 28083822 ~ 28094741 (+) True G25822
TU31514 other upstream 7361954 24192221 ~ 24194481 (+) True AMCG00007631
TU33841 other downstream 4051661 35611116 ~ 35620801 (+) False AMCG00007873
TU34416 other downstream 6585529 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 6609115 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 6796474 38355929 ~ 38412929 (+) False AMCG00007957
TU34460 other downstream 6872590 38432045 ~ 38436595 (+) True G27551

Expression Profile