RNA id: AMCG00007843


Basic Information

Item Value
RNA id AMCG00007843
length 306
RNA type mRNA
GC content 0.46
exon number 2
gene id AMCG00007843
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 32378435 ~ 32378904 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGAGGACATCATGATGCCAAACATGGAGGATAATGAGGACGAGGAGGACaatgaagaagaggaagagggggtAACTCTTACCCGACTCAATCAAGGGGGTTTAACAACTCCTGGTTCAAACAATGCTCATGGCTGGATTACTCGCTCTCTGTTGATGCTGCTTTCTGCTATGCATGTAGACTTTTTTTGCACCATGGGCCGGGTCATATCAAGAAGAGCTTCACCCATGATGGGTTTCGAAACTGAAGAAAAGGAGCAGAGAAACTGGCCCAACACAATGCAAGTGTTTCCCATAAACTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33399 lncRNA downstream 555466 31822742 ~ 31822969 (-) True G26646
TU33393 lncRNA downstream 572508 31804959 ~ 31805927 (-) False AMCG00007835
TU33372 lncRNA downstream 596544 31781638 ~ 31781891 (-) True G26626
TU33340 lncRNA downstream 692003 31685771 ~ 31686432 (-) True G26598
TU33235 lncRNA downstream 1035643 31338845 ~ 31342792 (-) False AMCG00007822
TU33438 lncRNA upstream 34376 32413280 ~ 32417500 (-) True G26684
TU33540 lncRNA upstream 1213318 33592222 ~ 33640336 (-) True G26764
TU33586 lncRNA upstream 1346678 33725582 ~ 33725896 (-) True G26800
TU33637 lncRNA upstream 1607643 33986547 ~ 33987991 (-) True G26847
TU33638 lncRNA upstream 1613231 33992135 ~ 33993958 (-) True G26848
AMCG00007835 mRNA downstream 562284 31804899 ~ 31816151 (-) True AMCG00007835
AMCG00007836 mRNA downstream 581391 31795695 ~ 31797044 (-) True AMCG00007836
AMCG00007831 mRNA downstream 650996 31701336 ~ 31727439 (-) True AMCG00007831
AMCG00007824 mRNA downstream 932372 31430316 ~ 31446063 (-) True AMCG00007824
AMCG00007823 mRNA downstream 1020044 31355360 ~ 31358391 (-) True AMCG00007823
AMCG00007842 mRNA upstream 149784 32528688 ~ 32804157 (-) True AMCG00007842
AMCG00007844 mRNA upstream 764652 33143556 ~ 33214893 (-) True AMCG00007844
AMCG00007849 mRNA upstream 1048095 33426999 ~ 33454436 (-) True AMCG00007849
AMCG00007848 mRNA upstream 1123416 33502320 ~ 33507381 (-) True AMCG00007848
AMCG00007851 mRNA upstream 1277377 33656281 ~ 33690820 (-) True AMCG00007851
TU31949 other downstream 6746843 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 7113484 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 8110514 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 8405770 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 11905731 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 2490531 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 4861185 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 5116007 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 5188713 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 5192053 37570957 ~ 37571488 (-) True G27439

Expression Profile