Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007857 |
| length | 627 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 2 |
| gene id | AMCG00007857 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 33866963 ~ 33870738 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0021522 | spinal cord motor neuron differentiation | biological_process |
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0048752 | semicircular canal morphogenesis | biological_process |
| GO:0031076 | embryonic camera-type eye development | biological_process |
| GO:0009952 | anterior/posterior pattern specification | biological_process |
| GO:0048009 | insulin-like growth factor receptor signaling pathway | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0046777 | protein autophosphorylation | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0043548 | phosphatidylinositol 3-kinase binding | molecular_function |
| GO:0043560 | insulin receptor substrate binding | molecular_function |
| GO:0005520 | insulin-like growth factor binding | molecular_function |
| GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004714 | transmembrane receptor protein tyrosine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33593 | lncRNA | upstream | 72022 | 33789940 ~ 33794941 (+) | False | AMCG00007854 |
| TU33459 | lncRNA | upstream | 978923 | 32887790 ~ 32888040 (+) | True | G26704 |
| TU33452 | lncRNA | upstream | 1244433 | 32622260 ~ 32622530 (+) | True | G26698 |
| TU33398 | lncRNA | upstream | 2043990 | 31822740 ~ 31822973 (+) | True | G26645 |
| TU33371 | lncRNA | upstream | 2085072 | 31781638 ~ 31781891 (+) | True | G26625 |
| TU33616 | lncRNA | downstream | 118308 | 33989046 ~ 33990588 (+) | True | G26826 |
| TU33615 | lncRNA | downstream | 121440 | 33992178 ~ 33993982 (+) | True | G26825 |
| TU33673 | lncRNA | downstream | 378458 | 34249196 ~ 34253554 (+) | True | G26875 |
| TU33671 | lncRNA | downstream | 378483 | 34249221 ~ 34253554 (+) | False | G26875 |
| TU33704 | lncRNA | downstream | 395383 | 34266121 ~ 34266418 (+) | True | G26895 |
| AMCG00007854 | mRNA | upstream | 76778 | 33763513 ~ 33790185 (+) | True | AMCG00007854 |
| AMCG00007853 | mRNA | upstream | 107121 | 33758703 ~ 33759842 (+) | True | AMCG00007853 |
| AMCG00007847 | mRNA | upstream | 219455 | 33646519 ~ 33647508 (+) | True | AMCG00007847 |
| AMCG00007846 | mRNA | upstream | 226627 | 33619303 ~ 33640336 (+) | True | AMCG00007846 |
| AMCG00007845 | mRNA | upstream | 509278 | 33350094 ~ 33357685 (+) | True | AMCG00007845 |
| AMCG00007858 | mRNA | downstream | 69664 | 33940402 ~ 33984780 (+) | True | AMCG00007858 |
| AMCG00007860 | mRNA | downstream | 130299 | 34001037 ~ 34010551 (+) | True | AMCG00007860 |
| AMCG00007863 | mRNA | downstream | 173874 | 34044612 ~ 34052190 (+) | True | AMCG00007863 |
| AMCG00007864 | mRNA | downstream | 194393 | 34065131 ~ 34083321 (+) | True | AMCG00007864 |
| AMCG00007865 | mRNA | downstream | 352161 | 34222899 ~ 34225641 (+) | True | AMCG00007865 |
| TU32939 | other | upstream | 4091928 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU32711 | other | upstream | 4863190 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32501 | other | upstream | 5412256 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32400 | other | upstream | 5772222 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU31514 | other | upstream | 9672482 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU33841 | other | downstream | 1740378 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU34416 | other | downstream | 4274246 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 4297832 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
| TU34447 | other | downstream | 4485191 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
| TU34460 | other | downstream | 4561307 | 38432045 ~ 38436595 (+) | True | G27551 |
