Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007884 |
| length | 635 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 2 |
| gene id | AMCG00007884 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 36017687 ~ 36019684 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006811 | ion transport | biological_process |
| GO:0045211 | postsynaptic membrane | cellular_component |
| GO:0005892 | acetylcholine-gated channel complex | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0015464 | acetylcholine receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33921 | lncRNA | upstream | 16753 | 35987301 ~ 36000934 (+) | True | G27089 |
| TU33907 | lncRNA | upstream | 114428 | 35903044 ~ 35903259 (+) | True | G27079 |
| TU33874 | lncRNA | upstream | 174845 | 35807368 ~ 35842842 (+) | True | G27052 |
| TU33840 | lncRNA | upstream | 409050 | 35608423 ~ 35608637 (+) | True | G27025 |
| TU33836 | lncRNA | upstream | 414505 | 35595413 ~ 35603182 (+) | True | G27021 |
| TU33940 | lncRNA | downstream | 9774 | 36029458 ~ 36030333 (+) | True | G27108 |
| TU33944 | lncRNA | downstream | 82612 | 36102296 ~ 36161392 (+) | False | G27111 |
| TU33945 | lncRNA | downstream | 82612 | 36102296 ~ 36182722 (+) | True | G27111 |
| TU33975 | lncRNA | downstream | 281813 | 36301497 ~ 36302841 (+) | True | AMCG00007889 |
| TU33980 | lncRNA | downstream | 286290 | 36305974 ~ 36306877 (+) | True | G27139 |
| AMCG00007881 | mRNA | upstream | 86199 | 35860631 ~ 35931488 (+) | True | AMCG00007881 |
| AMCG00007878 | mRNA | upstream | 202620 | 35811726 ~ 35815067 (+) | True | AMCG00007878 |
| AMCG00007873 | mRNA | upstream | 396970 | 35610982 ~ 35620717 (+) | True | AMCG00007873 |
| AMCG00007872 | mRNA | upstream | 468780 | 35537561 ~ 35548907 (+) | True | AMCG00007872 |
| AMCG00007871 | mRNA | upstream | 693797 | 35320619 ~ 35323890 (+) | True | AMCG00007871 |
| AMCG00007888 | mRNA | downstream | 265299 | 36284983 ~ 36294189 (+) | True | AMCG00007888 |
| AMCG00007889 | mRNA | downstream | 276534 | 36296218 ~ 36302811 (+) | False | AMCG00007889 |
| AMCG00007892 | mRNA | downstream | 384984 | 36404668 ~ 36425781 (+) | True | AMCG00007892 |
| AMCG00007896 | mRNA | downstream | 465302 | 36484986 ~ 36489446 (+) | True | AMCG00007896 |
| AMCG00007895 | mRNA | downstream | 507681 | 36527365 ~ 36534128 (+) | True | AMCG00007895 |
| TU33841 | other | upstream | 396886 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU32939 | other | upstream | 6242652 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU32711 | other | upstream | 7013914 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32501 | other | upstream | 7562980 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32400 | other | upstream | 7922946 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU34416 | other | downstream | 2125300 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 2148886 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
| TU34447 | other | downstream | 2336245 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
| TU34460 | other | downstream | 2412361 | 38432045 ~ 38436595 (+) | True | G27551 |
| TU34527 | other | downstream | 2673055 | 38692739 ~ 38708915 (+) | True | AMCG00007970 |
