RNA id: AMCG00007891


Basic Information

Item Value
RNA id AMCG00007891
length 660
RNA type mRNA
GC content 0.49
exon number 6
gene id AMCG00007891
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36304406 ~ 36306372 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGAGTTTGTTACAATGGCTCAGAATCAGTAAAAGATTgcactttttcttcttccaggaGCTCCATGCTCACCTCAATGGCTCCATCAGCGCGCAGACCATGGAGCGACTGATCGCCCTGAAGCCGCACCTCAACATCCAGCACCACATGACTGCCATCCAGAAAGGGCAGCACAGGACATTGGCCGAGTGTTTTCAGGTGTTCAAAGTTATCCATCAGCTAATTGTCACAGAGGAGGACCTCTTTACGGTTACCAGAGATGTGATACAAGAGTTTGCAGCAGATGGAGTGAAATACCTGGAGCTGAGGAGCACTCCTCGGGAAGAAAAGCAAGCCGGACTGACAAAGAGAAAGTATGTGGAGACAGTCATCGCAGCCATTAGACAGTGTAAACAGGAAGACTTGGACATTGAAGTCAGATTTTTACTGGCCATTGACAGGAGGAATGGACCAGatgttgccatggaaactgaGAAAATGGCAGAAGACTTTTTGTTGTCCAGTGATGGGTTGGTGGTTGGGCTGGACCTCAGTGGGGATCCAACAGCAGGCCATGGAAAGGATTTCCTGCCTGTGCTACAGAAAGCCAAGAGTGATGGACTGAAACTGGCGTTGCACCTGTCTGAGGTAAGCACACCCTCCTCTGGACAGTATTGG

Function

GO:

id name namespace
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:0019239 deaminase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33962 lncRNA downstream 155130 36102306 ~ 36149276 (-) True G27123
TU33941 lncRNA downstream 274094 36029469 ~ 36030312 (-) True G27109
TU33939 lncRNA downstream 277423 36026723 ~ 36026983 (-) True G27107
TU33930 lncRNA downstream 293411 36009476 ~ 36010995 (-) False AMCG00007883
TU33928 lncRNA downstream 298656 36003193 ~ 36005750 (-) False AMCG00007883
TU34020 lncRNA upstream 56099 36362471 ~ 36364455 (-) True G27173
TU34046 lncRNA upstream 161714 36468086 ~ 36468452 (-) True G27196
TU34047 lncRNA upstream 184824 36491196 ~ 36491846 (-) True G27197
TU34097 lncRNA upstream 437696 36744068 ~ 36745866 (-) True G27243
TU34106 lncRNA upstream 453973 36760345 ~ 36760589 (-) True G27252
AMCG00007887 mRNA downstream 36600 36179909 ~ 36267806 (-) True AMCG00007887
AMCG00007885 mRNA downstream 161763 36122270 ~ 36142643 (-) True AMCG00007885
AMCG00007886 mRNA downstream 243753 36038446 ~ 36060653 (-) True AMCG00007886
AMCG00007883 mRNA downstream 293416 36003194 ~ 36010990 (-) True AMCG00007883
AMCG00007882 mRNA downstream 362977 35931242 ~ 35941429 (-) True AMCG00007882
AMCG00007890 mRNA upstream 1192 36307564 ~ 36314143 (-) True AMCG00007890
AMCG00007893 mRNA upstream 124775 36431147 ~ 36465435 (-) True AMCG00007893
AMCG00007901 mRNA upstream 423949 36730321 ~ 36743469 (-) True AMCG00007901
AMCG00007907 mRNA upstream 536103 36842475 ~ 36846583 (-) True AMCG00007907
AMCG00007908 mRNA upstream 563759 36870131 ~ 36879680 (-) True AMCG00007908
TU33771 other downstream 1434599 34869435 ~ 34869807 (-) True G26961
TU31949 other downstream 10672814 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 11039455 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 12036485 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 12331741 23971671 ~ 23972665 (-) True G25026
TU34246 other upstream 933717 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 1188539 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 1261245 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 1264585 37570957 ~ 37571488 (-) True G27439
TU34329 other upstream 1266662 37573034 ~ 37588525 (-) True G27442

Expression Profile