Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00007906 |
| length | 834 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 7 |
| gene id | AMCG00007906 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 36847554 ~ 36855323 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006413 | translational initiation | biological_process |
| GO:0042256 | mature ribosome assembly | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0043022 | ribosome binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0003743 | translation initiation factor activity | molecular_function |
| id | description |
|---|---|
| K03264 | EIF6; translation initiation factor 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34125 | lncRNA | upstream | 2030 | 36843981 ~ 36845524 (+) | True | G27263 |
| TU34107 | lncRNA | upstream | 79615 | 36767653 ~ 36767939 (+) | True | G27253 |
| TU34069 | lncRNA | upstream | 120437 | 36685310 ~ 36727117 (+) | True | G27216 |
| TU34035 | lncRNA | upstream | 417623 | 36429406 ~ 36429931 (+) | True | G27187 |
| TU33999 | lncRNA | upstream | 456734 | 36329420 ~ 36390820 (+) | True | G27154 |
| TU34164 | lncRNA | downstream | 100859 | 36956182 ~ 36956454 (+) | True | G27300 |
| TU34204 | lncRNA | downstream | 237326 | 37092649 ~ 37093330 (+) | True | G27334 |
| TU34216 | lncRNA | downstream | 348547 | 37203870 ~ 37205956 (+) | False | AMCG00007923 |
| TU34287 | lncRNA | downstream | 639836 | 37495159 ~ 37499385 (+) | True | G27400 |
| TU34351 | lncRNA | downstream | 921742 | 37777065 ~ 37777462 (+) | True | G27462 |
| AMCG00007903 | mRNA | upstream | 5719 | 36815650 ~ 36841835 (+) | True | AMCG00007903 |
| AMCG00007905 | mRNA | upstream | 55816 | 36771612 ~ 36791738 (+) | True | AMCG00007905 |
| AMCG00007900 | mRNA | upstream | 91726 | 36743984 ~ 36755828 (+) | True | AMCG00007900 |
| AMCG00007902 | mRNA | upstream | 129039 | 36717754 ~ 36718515 (+) | True | AMCG00007902 |
| AMCG00007899 | mRNA | upstream | 136167 | 36700805 ~ 36711387 (+) | True | AMCG00007899 |
| AMCG00007904 | mRNA | downstream | 305 | 36855628 ~ 36865482 (+) | True | AMCG00007904 |
| AMCG00007912 | mRNA | downstream | 73730 | 36929053 ~ 36939598 (+) | True | AMCG00007912 |
| AMCG00007909 | mRNA | downstream | 101336 | 36956659 ~ 36969735 (+) | True | AMCG00007909 |
| AMCG00007914 | mRNA | downstream | 168089 | 37023412 ~ 37034789 (+) | True | AMCG00007914 |
| AMCG00007917 | mRNA | downstream | 185159 | 37040482 ~ 37052197 (+) | True | AMCG00007917 |
| TU33841 | other | upstream | 1226753 | 35611116 ~ 35620801 (+) | False | AMCG00007873 |
| TU32939 | other | upstream | 7072519 | 29765828 ~ 29775035 (+) | False | G26258 |
| TU32711 | other | upstream | 7843781 | 29003095 ~ 29003773 (+) | True | AMCG00007769 |
| TU32501 | other | upstream | 8392847 | 28453009 ~ 28454707 (+) | False | AMCG00007735 |
| TU32400 | other | upstream | 8752813 | 28083822 ~ 28094741 (+) | True | G25822 |
| TU34416 | other | downstream | 1289661 | 38144984 ~ 38146850 (+) | True | G27518 |
| TU34423 | other | downstream | 1313247 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
| TU34447 | other | downstream | 1500606 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
| TU34460 | other | downstream | 1576722 | 38432045 ~ 38436595 (+) | True | G27551 |
| TU34527 | other | downstream | 1837416 | 38692739 ~ 38708915 (+) | True | AMCG00007970 |
