RNA id: AMCG00007916


Basic Information

Item Value
RNA id AMCG00007916
length 1437
RNA type mRNA
GC content 0.61
exon number 12
gene id AMCG00007916
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37013304 ~ 37023811 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCTCTCCAGCCCGCTGACCTGTACACACCTGCGCTCACTCACCTGGGCGCGCTGCTGCACGACGGGCCGCGCCGGGCCGGCTGGGACAGGCCAGGGCTGGACCAGTCTGGGGTGACTCGGGATTCAGTGCGGCAGTACCTCCAGTTCCACCCTGACCAGACCGTGCTCATCCTACATGCCAAGGTGGCCCAGAAATCCTATGGCAATGAGAAGCGGTTCTTCTGTCCACCCCCATGTGTCTACCTCAGCGGGCCGGGCTGGAAACTCAAGCAAGAGCAGCTGAGAGCCAGTGGCCTGGGCGACTCGAGCTGCAGGATTTGTGGCTACATGGGTTTGGACAATGCAGGGGAAGCCCAGCTGGACACGCTGAAGCTGAACTTCGAGGAGCAGCCTGATTCCAAGAGGTTTGGCTGTGCAAAGGCTCTGTACATCTCTGATTCcgacaaaagaaaacacttccGGCTTGTCCTGAAGCTTTTCTTCAGCAATGGGCAGGAGATAGGCTCGTTCTACAGCAGGCTGATCAAAGTCATCTCAAAGCCGTCCCAGAAGAAGCAGTCGATGAAGAATGCAGACTTGTGTATCTCCTCGGGGTCGAAGGTGTCTCTGTTTAACCGGCTACGCTCCCAGACTGTCAGCACGCGTTACCTTTCCGTGGAGGCCGGAGCTTTTGTGGCCAGTGCCCGGCAGTGGGCGGCCTTCACCGTCACCCTGGtggAGGAGCAGCGGGCCGGGCAGGGCGAGTACCCAGTGCGCGAGGGTTACGTCTGCTACGGCTGCGCAGTCCAGCTGGTGTGCACTACCACTGGGGTGGCACTCCCCCCCATGGTGATCCGCAAGGTGAACAAGCAGTATGCCATTCTGGACGTGGACGAGCCAGTCTCCCAGCTGCACAAGTGTGCTTTCCAGCTCAAGGACAGCAATAGGATGTACCTGTGTCTGTCCAATGAGAAAATCATCCAGTTCCAGGCCTCTGGCTGCCCCAGGGAGCCCAACAAAGAGCTGCTGAATGACGGATCGTGCTGGACCATCATCGGCACGGAGACAGTGGAGTACACCTTCAGCGAGAGCCTGTCCTGTGTGCAGGCCTCCGTCACCCCCATCCCCCTCGTCAGCTCTCTGGAGCTCAATGGAGGCGGGGACGTGGCCATGCTGGAGATCCTGAGCGGATGTTGTCTGTTTGTTGACTGCAGGAGCCCCAGGTCGCTGCTGTGCGTGGTCCCAGACGTGTCAGTGTTCAGCGGCGAGTGGCGGTGGCGGCGCCGGCCGATCGCAGTGCCGCTGTCCCTGGTGCGCAGCGACGGACTGCTCTACCGCAGCTCCTTCTCCTTCACCTACACCCCCGAGCAGAGCCCGCTGGCTTGGCCCCGGACCATCTGCCAGGTCATTGCAGGCTGGGGAGACCTGCCTGAACTGGAGGTGTTGCCCTCCCTGTAA

Function

GO: NA

KEGG:

id description
K06053 RBPSUH, RBPJK; recombining binding protein suppressor of hairless

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34168 lncRNA downstream 43548 36967127 ~ 36969756 (-) True G27302
TU34133 lncRNA downstream 169339 36843330 ~ 36843965 (-) False AMCG00007907
TU34108 lncRNA downstream 245365 36767653 ~ 36767939 (-) True G27254
TU34106 lncRNA downstream 252715 36760345 ~ 36760589 (-) True G27252
TU34097 lncRNA downstream 267438 36744068 ~ 36745866 (-) True G27243
TU34205 lncRNA upstream 68838 37092649 ~ 37093300 (-) True G27335
TU34322 lncRNA upstream 542958 37566769 ~ 37566983 (-) True G27435
TU34323 lncRNA upstream 543392 37567203 ~ 37567566 (-) True G27436
TU34325 lncRNA upstream 546448 37570259 ~ 37570881 (-) True G27438
TU34352 lncRNA upstream 753258 37777069 ~ 37777318 (-) True G27463
AMCG00007915 mRNA downstream 20330 36988663 ~ 36992974 (-) True AMCG00007915
AMCG00007910 mRNA downstream 71436 36936827 ~ 36941868 (-) True AMCG00007910
AMCG00007911 mRNA downstream 112634 36885380 ~ 36900670 (-) True AMCG00007911
AMCG00007908 mRNA downstream 133624 36870131 ~ 36879680 (-) True AMCG00007908
AMCG00007907 mRNA downstream 166721 36842475 ~ 36846583 (-) True AMCG00007907
AMCG00007920 mRNA upstream 114416 37138227 ~ 37141287 (-) True AMCG00007920
AMCG00007926 mRNA upstream 193959 37217770 ~ 37238928 (-) True AMCG00007926
AMCG00007929 mRNA upstream 216273 37240084 ~ 37242946 (-) True AMCG00007929
AMCG00007928 mRNA upstream 224568 37248379 ~ 37259255 (-) True AMCG00007928
AMCG00007927 mRNA upstream 236755 37260566 ~ 37267059 (-) True AMCG00007927
TU33771 other downstream 2143497 34869435 ~ 34869807 (-) True G26961
TU31949 other downstream 11381712 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 11748353 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 12745383 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 13040639 23971671 ~ 23972665 (-) True G25026
TU34246 other upstream 216278 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 471100 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 543806 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 547146 37570957 ~ 37571488 (-) True G27439
TU34329 other upstream 549223 37573034 ~ 37588525 (-) True G27442

Expression Profile