RNA id: AMCG00007924



Basic Information


Item Value
RNA id AMCG00007924
length 909
RNA type mRNA
GC content 0.62
exon number 7
gene id AMCG00007924
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37244267 ~ 37246807 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCCCCGAAGGGACGCCCGGCTCAGTCGGTGGCCCAGCTGAAACAAGCCGGCAACGAGCGCTTCAAGAGCGGCCAGTACGGGGAGGCCGTCTTGCTCTACTCCCAGGCCATCAAACTGCACGAAAAGTCCGAGGAGCTGAGTATCCTGTACTCCAACCGCGCAGCCAGTTACCTGAAGGATGGGAACTGTGCGGAGTGCGTGAAggactgcagtgtCTCTCTGGACCTCTCTCCGTTCGGAGTGAAGCCGCTGCTGAGGCGGGCCGCGGCGTACGAGGCACTGGAGAGATACAGGCTGGCCTACGTGGATTACAAGACCGTCCTGCAGGTCGACTGCGGGATCCCTGCGGCCCACGACGGCACTAACAGGATGACGAAGGCCCTATCGGAGCAGGACGGGCCGTGCTGGCGGGAGAAGCTGCCCCCAATCCCCCCAGTCCCGCTGGAGGTCCGCGAGAGACTGGCACAGTCCACTACCACCATCAAAGCTGTCCCAACACCGCAGCAGAATGGTGCCGCCGACACAgGCGCCGAGGCCGTGAAGCGCGCCCAGTTGCTGAAGGAGGAAGGCAACACGCTGGTGAAGAAGGGGGAACACAGGAGAGCCGCGGAGAAATACAGCGAGAGCCTCAATCTCAATGCCAGCGAGGTCACCACCTACACCAACAGGGCTCTGTGCTACCTGTCTCTGAAGATGTACAGAGAGGCCGTGCGGGACTGCGAGGAGGCGCTGAGGCTCGACCCCAGCAACATCAAGGCGCTATACAGGCGAGCACAGGCCCGCAAGGAACTGAAGGAGTACAAGGCCTGCGCTGCTGATATCAACACCCTGCTGAAGATCGAGCCCCAGAACACAGCTGCTCAGAAACTGCAGCAGGAGCTGCAGCGGGTGAAGAAGGGGCAGTGA

Function


GO: NA

KEGG:

id description
K17766 TOM34; mitochondrial import receptor subunit TOM34

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU34216 lncRNA upstream 38311 37203870 ~ 37205956 (+) False AMCG00007923
TU34204 lncRNA upstream 150937 37092649 ~ 37093330 (+) True G27334
TU34164 lncRNA upstream 287813 36956182 ~ 36956454 (+) True G27300
TU34125 lncRNA upstream 398743 36843981 ~ 36845524 (+) True G27263
TU34107 lncRNA upstream 476328 36767653 ~ 36767939 (+) True G27253
TU34287 lncRNA downstream 248352 37495159 ~ 37499385 (+) True G27400
TU34351 lncRNA downstream 530258 37777065 ~ 37777462 (+) True G27462
TU34384 lncRNA downstream 770061 38016868 ~ 38017144 (+) True G27489
TU34393 lncRNA downstream 780573 38027380 ~ 38027923 (+) True G27497
TU34464 lncRNA downstream 1192767 38439574 ~ 38439892 (+) True G27552
AMCG00007923 mRNA upstream 27709 37204747 ~ 37216558 (+) True AMCG00007923
AMCG00007925 mRNA upstream 44443 37191982 ~ 37199824 (+) True AMCG00007925
AMCG00007930 mRNA upstream 73165 37168866 ~ 37171102 (+) True AMCG00007930
AMCG00007922 mRNA upstream 108051 37135667 ~ 37136216 (+) True AMCG00007922
AMCG00007919 mRNA upstream 127071 37113631 ~ 37117196 (+) True AMCG00007919
AMCG00007931 mRNA downstream 89764 37336571 ~ 37346115 (+) True AMCG00007931
AMCG00007934 mRNA downstream 223116 37469923 ~ 37481171 (+) True AMCG00007934
AMCG00007938 mRNA downstream 248391 37495198 ~ 37496202 (+) True AMCG00007938
AMCG00007940 mRNA downstream 249410 37496217 ~ 37501731 (+) True AMCG00007940
AMCG00007937 mRNA downstream 307186 37553993 ~ 37574386 (+) True AMCG00007937
TU33841 other upstream 1623466 35611116 ~ 35620801 (+) False AMCG00007873
TU32939 other upstream 7469232 29765828 ~ 29775035 (+) False G26258
TU32711 other upstream 8240494 29003095 ~ 29003773 (+) True AMCG00007769
TU32501 other upstream 8789560 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 9149526 28083822 ~ 28094741 (+) True G25822
TU34416 other downstream 898177 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 921763 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 1109122 38355929 ~ 38412929 (+) False AMCG00007957
TU34460 other downstream 1185238 38432045 ~ 38436595 (+) True G27551
TU34527 other downstream 1445932 38692739 ~ 38708915 (+) True AMCG00007970

Expression Profile