Item | Value |
---|---|
RNA id | AMCG00007971 |
length | 918 |
RNA type | mRNA |
GC content | 0.56 |
exon number | 7 |
gene id | AMCG00007971 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030123.1 |
NCBI id | CM030123.1 |
chromosome length | 53548854 |
location | 38713761 ~ 38726766 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0036269 | swimming behavior | biological_process |
GO:0005198 | structural molecule activity | molecular_function |
id | description |
---|---|
K10707 | VAPB, ALS8; vesicle-associated membrane protein-associated protein B |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU34473 | lncRNA | upstream | 231370 | 38481297 ~ 38482391 (+) | True | G27561 |
TU34465 | lncRNA | upstream | 271690 | 38441536 ~ 38442071 (+) | True | G27553 |
TU34464 | lncRNA | upstream | 273869 | 38439574 ~ 38439892 (+) | True | G27552 |
TU34393 | lncRNA | upstream | 685838 | 38027380 ~ 38027923 (+) | True | G27497 |
TU34384 | lncRNA | upstream | 696617 | 38016868 ~ 38017144 (+) | True | G27489 |
TU34587 | lncRNA | downstream | 65683 | 38792449 ~ 38834594 (+) | True | G27648 |
TU34610 | lncRNA | downstream | 128765 | 38855531 ~ 38855767 (+) | True | G27667 |
TU34617 | lncRNA | downstream | 179288 | 38906054 ~ 38908182 (+) | True | G27670 |
TU34673 | lncRNA | downstream | 327773 | 39054539 ~ 39055627 (+) | True | G27708 |
TU34674 | lncRNA | downstream | 332765 | 39059531 ~ 39059734 (+) | True | G27709 |
AMCG00007970 | mRNA | upstream | 9556 | 38692843 ~ 38704205 (+) | False | AMCG00007970 |
AMCG00007964 | mRNA | upstream | 52430 | 38636482 ~ 38661331 (+) | True | AMCG00007964 |
AMCG00007963 | mRNA | upstream | 86025 | 38621122 ~ 38627736 (+) | True | AMCG00007963 |
AMCG00007965 | mRNA | upstream | 108748 | 38576122 ~ 38605013 (+) | True | AMCG00007965 |
AMCG00007959 | mRNA | upstream | 143538 | 38564475 ~ 38570223 (+) | True | AMCG00007959 |
AMCG00007968 | mRNA | downstream | 31090 | 38757856 ~ 38767584 (+) | True | AMCG00007968 |
AMCG00007969 | mRNA | downstream | 41445 | 38768211 ~ 38784621 (+) | True | AMCG00007969 |
AMCG00007979 | mRNA | downstream | 134761 | 38861527 ~ 38898891 (+) | True | AMCG00007979 |
AMCG00007981 | mRNA | downstream | 173562 | 38900328 ~ 38904511 (+) | True | AMCG00007981 |
AMCG00007978 | mRNA | downstream | 182519 | 38909285 ~ 38917976 (+) | True | AMCG00007978 |
TU34527 | other | upstream | 4846 | 38692739 ~ 38708915 (+) | True | AMCG00007970 |
TU34460 | other | upstream | 277166 | 38432045 ~ 38436595 (+) | True | G27551 |
TU34447 | other | upstream | 300832 | 38355929 ~ 38412929 (+) | False | AMCG00007957 |
TU34423 | other | upstream | 543700 | 38168570 ~ 38170061 (+) | False | AMCG00007952 |
TU34416 | other | upstream | 566911 | 38144984 ~ 38146850 (+) | True | G27518 |
TU34851 | other | downstream | 776313 | 39503079 ~ 39504377 (+) | True | G27847 |
TU34945 | other | downstream | 1105623 | 39832389 ~ 39834936 (+) | False | AMCG00008020 |
TU35023 | other | downstream | 1329866 | 40056632 ~ 40059386 (+) | True | G27974 |
TU35066 | other | downstream | 1514546 | 40241312 ~ 40247238 (+) | True | AMCG00008036 |
TU35555 | other | downstream | 3266093 | 41992859 ~ 41993377 (+) | True | G28395 |