RNA id: AMCG00007977


Basic Information

Item Value
RNA id AMCG00007977
length 333
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00007977
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38831105 ~ 38836137 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGGATGTGTCACAGCCTGAGATCCAGGCTGATCGGACCCCAGTCTGCCGTCGCCTACAGCGGGCGGGCGGGCGGCGGGGAGGCGGACGCGGGACACCTGGACTCCGCTGCGGACTCGGAGCTGCGCGACCGGCGCCGGGTGGAGGAGAGAGCCCGCATCAAGGCGGAGAACAAGCGGAGCCGAAACATCGACAAAAGCCTGAAAGCTGAGAAAAGGGAATACAAGCAAACGCACAGATTGCTGCTGCTGGGACGGGGGTGGACGGGGGGCGGCAGTGACTGCGGGGATGGCCGGCAGTGCGGCGGCTCAGTGTTCGCGAGGAAACTCTGA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0019001 guanyl nucleotide binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34602 lncRNA downstream 51353 38776161 ~ 38779752 (-) False G27661
TU34601 lncRNA downstream 51353 38777237 ~ 38779752 (-) True G27661
TU34574 lncRNA downstream 63537 38749127 ~ 38767568 (-) False G27639
TU34572 lncRNA downstream 63537 38764444 ~ 38767568 (-) True G27639
TU34553 lncRNA downstream 118768 38710852 ~ 38712337 (-) True G27626
TU34611 lncRNA upstream 19411 38855548 ~ 38855777 (-) True G27668
TU34636 lncRNA upstream 70016 38906153 ~ 38907811 (-) True AMCG00007984
TU34638 lncRNA upstream 84833 38920970 ~ 38922688 (-) True G27686
TU34645 lncRNA upstream 88444 38924581 ~ 38927571 (-) True AMCG00007983
TU34831 lncRNA upstream 618903 39455040 ~ 39455858 (-) True G27833
AMCG00007976 mRNA downstream 13373 38794104 ~ 38817732 (-) True AMCG00007976
AMCG00007975 mRNA downstream 40320 38785536 ~ 38790785 (-) True AMCG00007975
AMCG00007972 mRNA downstream 88062 38733689 ~ 38743043 (-) True AMCG00007972
AMCG00007973 mRNA downstream 138331 38679465 ~ 38692774 (-) True AMCG00007973
AMCG00007974 mRNA downstream 151954 38676674 ~ 38679151 (-) True AMCG00007974
AMCG00007984 mRNA upstream 68621 38904758 ~ 38906982 (-) False AMCG00007984
AMCG00007983 mRNA upstream 90048 38926185 ~ 38937663 (-) False AMCG00007983
AMCG00007982 mRNA upstream 106698 38942835 ~ 38949522 (-) True AMCG00007982
AMCG00007988 mRNA upstream 140778 38976915 ~ 38985485 (-) True AMCG00007988
AMCG00007990 mRNA upstream 196650 39032787 ~ 39049320 (-) True AMCG00007990
TU34421 other downstream 666563 38161286 ~ 38164542 (-) True G27522
TU34400 other downstream 739227 38085929 ~ 38091878 (-) True G27502
TU34329 other downstream 1242580 37573034 ~ 37588525 (-) True G27442
TU34326 other downstream 1259617 37570957 ~ 37571488 (-) True G27439
TU34324 other downstream 1261821 37567617 ~ 37569284 (-) True G27437
TU34684 other upstream 211152 39047289 ~ 39049597 (-) False AMCG00007990
TU34686 other upstream 218016 39054153 ~ 39055679 (-) True G27720
TU34691 other upstream 252785 39088922 ~ 39091755 (-) False AMCG00007993
TU34865 other upstream 664184 39500321 ~ 39504592 (-) True G27861
TU35307 other upstream 2180022 41016159 ~ 41017248 (-) True G28202

Expression Profile