RNA id: AMCG00008083



Basic Information


Item Value
RNA id AMCG00008083
length 327
RNA type mRNA
GC content 0.64
exon number 1
gene id AMCG00008083
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41821668 ~ 41821994 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCTTGCTTGGGCAGACTGTGGGACTGGGTCTGGCCCGACTTCAGCTCCCCGGCCACCGTGCGCCCCGCCGACATCAGCACGGTCTCCGGGGACGTGAAGATCCCGACCCCCAGGAAGAAGCCGAGCCGGCTGTACGCCGCGCTGTACGACTTCGAGGCGCGGAGCGAGGAGGAGCTGTCGGTGAAGGAGGGGGACACACTGTCGGTGCTTGAGAAGCGCGGCGAGTACGTCCTGGCCAAGAAACTGCACGGGTCCCTGGAGTCGGGGCTGGTGCCGGCTAACTACGTGATGGTGTTACAGGATGAATTTGCAAATCACCCGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35460 lncRNA upstream 93235 41728212 ~ 41728433 (+) True G28329
TU35458 lncRNA upstream 125960 41695354 ~ 41695708 (+) True G28327
TU35429 lncRNA upstream 432884 41388583 ~ 41388784 (+) True G28303
TU35427 lncRNA upstream 443375 41378051 ~ 41378293 (+) True G28301
TU35426 lncRNA upstream 449847 41370866 ~ 41371821 (+) True G28300
TU35467 lncRNA downstream 24998 41846992 ~ 41849950 (+) False G28332
TU35472 lncRNA downstream 24998 41846992 ~ 41865026 (+) False G28332
TU35471 lncRNA downstream 103851 41925845 ~ 41936214 (+) True G28332
TU35554 lncRNA downstream 155265 41977259 ~ 41980084 (+) True G28394
TU35585 lncRNA downstream 284873 42106867 ~ 42110075 (+) True G28416
AMCG00008080 mRNA upstream 8926 41800249 ~ 41812742 (+) True AMCG00008080
AMCG00008081 mRNA upstream 31990 41769950 ~ 41789678 (+) True AMCG00008081
AMCG00008077 mRNA upstream 258479 41558420 ~ 41563189 (+) True AMCG00008077
AMCG00008070 mRNA upstream 464835 41350428 ~ 41356833 (+) True AMCG00008070
AMCG00008065 mRNA upstream 692794 41123903 ~ 41128874 (+) True AMCG00008065
AMCG00008084 mRNA downstream 4746 41826740 ~ 41832892 (+) True AMCG00008084
AMCG00008082 mRNA downstream 11268 41833262 ~ 41846010 (+) True AMCG00008082
AMCG00008090 mRNA downstream 70895 41892889 ~ 41893875 (+) True AMCG00008090
AMCG00008088 mRNA downstream 86549 41908543 ~ 41915531 (+) True AMCG00008088
AMCG00008087 mRNA downstream 94712 41916706 ~ 41921311 (+) True AMCG00008087
TU35066 other upstream 1574430 40241312 ~ 40247238 (+) True AMCG00008036
TU35023 other upstream 1762282 40056632 ~ 40059386 (+) True G27974
TU34945 other upstream 1986732 39832389 ~ 39834936 (+) False AMCG00008020
TU34851 other upstream 2317291 39503079 ~ 39504377 (+) True G27847
TU34527 other upstream 3112753 38692739 ~ 38708915 (+) True AMCG00007970
TU35555 other downstream 170865 41992859 ~ 41993377 (+) True G28395
TU35844 other downstream 1283719 43105713 ~ 43108242 (+) True G28636
TU35886 other downstream 1324779 43146773 ~ 43149043 (+) False AMCG00008120
TU35919 other downstream 1470602 43292596 ~ 43301422 (+) False AMCG00008132
TU36366 other downstream 3201154 45023148 ~ 45036416 (+) True AMCG00008177

Expression Profile