RNA id: AMCG00008084


Basic Information

Item Value
RNA id AMCG00008084
length 213
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00008084
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41826740 ~ 41832892 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCAGACCTGGCCCTCCTTCAGAGCTGCGGAAAGGAAGACATGAtgAGGGAGCACTTGGACGCCGACTCCTGGGAGAAACCTCGGGATCAGTTCAGGCTCAAGAGGAAACTCGGGGAAGGCAACTTCGGAGAGGTGTGGGAAGGCATCTGGGTGcccaagaaacaaaatgtggccataaaaatgttaaaacaagATATACCTTTGGAATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35460 lncRNA upstream 98307 41728212 ~ 41728433 (+) True G28329
TU35458 lncRNA upstream 131032 41695354 ~ 41695708 (+) True G28327
TU35429 lncRNA upstream 437956 41388583 ~ 41388784 (+) True G28303
TU35427 lncRNA upstream 448447 41378051 ~ 41378293 (+) True G28301
TU35426 lncRNA upstream 454919 41370866 ~ 41371821 (+) True G28300
TU35467 lncRNA downstream 14100 41846992 ~ 41849950 (+) False G28332
TU35472 lncRNA downstream 14100 41846992 ~ 41865026 (+) False G28332
TU35471 lncRNA downstream 92953 41925845 ~ 41936214 (+) True G28332
TU35554 lncRNA downstream 144367 41977259 ~ 41980084 (+) True G28394
TU35585 lncRNA downstream 273975 42106867 ~ 42110075 (+) True G28416
AMCG00008083 mRNA upstream 4746 41821668 ~ 41821994 (+) True AMCG00008083
AMCG00008080 mRNA upstream 13998 41800249 ~ 41812742 (+) True AMCG00008080
AMCG00008081 mRNA upstream 37062 41769950 ~ 41789678 (+) True AMCG00008081
AMCG00008077 mRNA upstream 263551 41558420 ~ 41563189 (+) True AMCG00008077
AMCG00008070 mRNA upstream 469907 41350428 ~ 41356833 (+) True AMCG00008070
AMCG00008082 mRNA downstream 370 41833262 ~ 41846010 (+) True AMCG00008082
AMCG00008090 mRNA downstream 59997 41892889 ~ 41893875 (+) True AMCG00008090
AMCG00008088 mRNA downstream 75651 41908543 ~ 41915531 (+) True AMCG00008088
AMCG00008087 mRNA downstream 83814 41916706 ~ 41921311 (+) True AMCG00008087
AMCG00008093 mRNA downstream 211912 42044804 ~ 42055393 (+) True AMCG00008093
TU35066 other upstream 1579502 40241312 ~ 40247238 (+) True AMCG00008036
TU35023 other upstream 1767354 40056632 ~ 40059386 (+) True G27974
TU34945 other upstream 1991804 39832389 ~ 39834936 (+) False AMCG00008020
TU34851 other upstream 2322363 39503079 ~ 39504377 (+) True G27847
TU34527 other upstream 3117825 38692739 ~ 38708915 (+) True AMCG00007970
TU35555 other downstream 159967 41992859 ~ 41993377 (+) True G28395
TU35844 other downstream 1272821 43105713 ~ 43108242 (+) True G28636
TU35886 other downstream 1313881 43146773 ~ 43149043 (+) False AMCG00008120
TU35919 other downstream 1459704 43292596 ~ 43301422 (+) False AMCG00008132
TU36366 other downstream 3190256 45023148 ~ 45036416 (+) True AMCG00008177

Expression Profile