Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008087 |
| length | 639 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 3 |
| gene id | AMCG00008087 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 41916706 ~ 41921311 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35472 | lncRNA | upstream | 51680 | 41846992 ~ 41865026 (+) | False | G28332 |
| TU35467 | lncRNA | upstream | 66756 | 41846992 ~ 41849950 (+) | False | G28332 |
| TU35460 | lncRNA | upstream | 188273 | 41728212 ~ 41728433 (+) | True | G28329 |
| TU35458 | lncRNA | upstream | 220998 | 41695354 ~ 41695708 (+) | True | G28327 |
| TU35429 | lncRNA | upstream | 527922 | 41388583 ~ 41388784 (+) | True | G28303 |
| TU35471 | lncRNA | downstream | 4534 | 41925845 ~ 41936214 (+) | True | G28332 |
| TU35554 | lncRNA | downstream | 55948 | 41977259 ~ 41980084 (+) | True | G28394 |
| TU35585 | lncRNA | downstream | 185556 | 42106867 ~ 42110075 (+) | True | G28416 |
| TU35590 | lncRNA | downstream | 196610 | 42117921 ~ 42186382 (+) | True | G28421 |
| TU35677 | lncRNA | downstream | 511525 | 42432836 ~ 42437228 (+) | False | AMCG00008102 |
| AMCG00008088 | mRNA | upstream | 1175 | 41908543 ~ 41915531 (+) | True | AMCG00008088 |
| AMCG00008090 | mRNA | upstream | 22831 | 41892889 ~ 41893875 (+) | True | AMCG00008090 |
| AMCG00008082 | mRNA | upstream | 70696 | 41833262 ~ 41846010 (+) | True | AMCG00008082 |
| AMCG00008084 | mRNA | upstream | 83814 | 41826740 ~ 41832892 (+) | True | AMCG00008084 |
| AMCG00008083 | mRNA | upstream | 94712 | 41821668 ~ 41821994 (+) | True | AMCG00008083 |
| AMCG00008093 | mRNA | downstream | 123493 | 42044804 ~ 42055393 (+) | True | AMCG00008093 |
| AMCG00008094 | mRNA | downstream | 150438 | 42071749 ~ 42072173 (+) | True | AMCG00008094 |
| AMCG00008092 | mRNA | downstream | 170246 | 42091557 ~ 42100380 (+) | True | AMCG00008092 |
| AMCG00008097 | mRNA | downstream | 291061 | 42212372 ~ 42213085 (+) | True | AMCG00008097 |
| AMCG00008098 | mRNA | downstream | 358458 | 42279769 ~ 42289436 (+) | True | AMCG00008098 |
| TU35066 | other | upstream | 1669468 | 40241312 ~ 40247238 (+) | True | AMCG00008036 |
| TU35023 | other | upstream | 1857320 | 40056632 ~ 40059386 (+) | True | G27974 |
| TU34945 | other | upstream | 2081770 | 39832389 ~ 39834936 (+) | False | AMCG00008020 |
| TU34851 | other | upstream | 2412329 | 39503079 ~ 39504377 (+) | True | G27847 |
| TU34527 | other | upstream | 3207791 | 38692739 ~ 38708915 (+) | True | AMCG00007970 |
| TU35555 | other | downstream | 71548 | 41992859 ~ 41993377 (+) | True | G28395 |
| TU35844 | other | downstream | 1184402 | 43105713 ~ 43108242 (+) | True | G28636 |
| TU35886 | other | downstream | 1225462 | 43146773 ~ 43149043 (+) | False | AMCG00008120 |
| TU35919 | other | downstream | 1371285 | 43292596 ~ 43301422 (+) | False | AMCG00008132 |
| TU36366 | other | downstream | 3101837 | 45023148 ~ 45036416 (+) | True | AMCG00008177 |
